Gene Information

Name : hemC (XOO_3778)
Accession : YP_452807.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 4272370 - 4273284 bp
Length : 915 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
ATGACCACGCTCCGCATCGCTACCCGCAAAAGCCCGCTCGCCCTCTGGCAGAGCGAACACGTCGCCGCCGCGTTGCGTCA
GCACCACCCTGGACTGGAGGTGGTGCTGGTGCCGATGAGCACCCGTGGCGACGAAGTGCTGGACCGCTCGCTCGCGGCGA
TCGGTGGCAAGGGCCTGTTCTTGAAGGAACTGGAACTGGCGATGTTGCGCGGCGACGCCGATTGCGCCGTGCATTCGTTC
AAGGATGTGCCGATGGAACTGGACGACCCGTTCGTGCTGCCTGCGATCCTGGAACGCGGCGACCCGGCCGATGCGCTGGT
GTCCAACCTCTACGCCAGCCTGCAGGCGCTGCCGCTGGGCGCACGCGTGGGCACGTCTTCGCTGCGTCGCCAGGCGCAGT
TGCGCGCTGCGCGCCCGGACCTGGAATTGATCGACCTGCGCGGCAACGTCAACACGCGTCTGGCCAAGCTCGACAACGGC
GGCTACGACGCCATCGTGCTGGCCTGCGCCGGCCTGCAGCGGCTCGGGTTGGATGAACGCATCAGCGCGCGGCTGGATGC
ACCGGAGTGGTTGCCGGCGCCTGCACAAGGCGCGGTGGCGGTGGAATGCCGTGGCGACGACGCGCGCATCCACAGTCTGC
TGGCAGTGCTGGATGCCGGCCGCACGCGTGCCTGCGTGGAAGCCGAGCGGGCAATGAATCGCGCGCTGCACGGCAGCTGC
CATGTGCCGGTGGCCGCCCTTGCGCGCTGGGAAGGCGAGGGTCTGTTTCTGCAGGGCATGGTCGGCAGCGCCAGCGACGG
CCGCTTGATCCACGCCGACGCCCATGGCAGTGCCGACGACACTGAAGACCTGGGCCGCCGCGTTGCGCAAGGCCTGTTCG
ACAAGGGTGCCGCGCAGTTGCTGGCTGCGCTGTAA

Protein sequence : 
MTTLRIATRKSPLALWQSEHVAAALRQHHPGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFLKELELAMLRGDADCAVHSF
KDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNG
GYDAIVLACAGLQRLGLDERISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC
HVPVAALARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEDLGRRVAQGLFDKGAAQLLAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-58 54
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-58 54