Gene Information

Name : XOO_3695 (XOO_3695)
Accession : YP_452724.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : -
Position : 4173994 - 4175148 bp
Length : 1155 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGGATGCTTCCCGCACTCAGGCATTGTGCAATGCGCGTGTACTCACCGATGACGGCCTGCAGGACGGCCTGGTCGTGGT
GCTGGCTGGCACGCAGATCCAGGCGATTGTGCCGGCCGATGATGCACGCGTTGCGCAGGCCGCCACGCGCGTGGATCTGG
GTGGCGCCACCTTGTTGCCAGGCTTTATCGACATCCAGGTCAACGGCGGCGGTGGCGTATTGTTCAACAACGCACGCGAC
CCGCAGGCGCTGGCGACCATCGCCGCCGCGCATCGTCGTTTCGGCACCACCGGCATGCTGCCGACCTTGATCAGCGATAC
CGCGCAGGTGATGGCCGAAGCGATCGAGGCCACCCGCGCAGCCATCGCGCAAGGCGTGCCCGGCGTGCTCGGCATCCATC
TGGAAGGCCCGTACCTGAGCCCTGCACGCAAGGGCACGCATGACGAACACAAGTTCCGGCTGCCGGACGCGCACGAAATT
GCCGTCGACACATCGCTGGACAACGGCGTCACCTTGATCACGCTCGCACCCGAGCGCGTGCCGCTGGACGATATCCGTGC
CTTCGTTGCCGGCGGCGCGATCGTGTTCGCTGGCCACACCGCGGCGACTTACGAGCAGGCACGCGACGGCATCGCTGCCG
GGGTGAGCGGCTTCACGCACGTGTACAACGCGATGTCGCAACTGGCTGGCCGCGAACCCAATGCAGTCGGCGCAGCGCTG
GAAGACCCCAACGTGTGGTGCGGCGTCATCGTCGATGGCGTGCATGTGCACCCGGCCAGCCTGCGCGTGGCGCTCGCGGC
CAAGCCACGCGGCAAGCTGTTGCTGGTCACCGACGCCATGCCCATGGTCGGCAGCGACAGCCCCGGCTTCGACCTGTACG
GCGAAACCATCACCGCCTTGGATGGCGTGGTGCGCAATGCCGACGGCGCACTGGCCGGTTCGGCATTGGACATGGCCACC
GCCGTGCGCAACAGCGTGCGCTGGCTCGGTGTGGACCTGGCCGAAGCCGCGCGCATGGCCTCGACGTATCCGGCGCAATG
TATCGGCCTTGGCGAACGTCTCGGCCGCATTGCGCCAGGCTACCAGGCCGACCTAGTGCTGGTGGATGCCGACGTGCAGG
TGCTGGGCACCTGGATCGCTGGGCAGCGCGACTAA

Protein sequence :
MDASRTQALCNARVLTDDGLQDGLVVVLAGTQIQAIVPADDARVAQAATRVDLGGATLLPGFIDIQVNGGGGVLFNNARD
PQALATIAAAHRRFGTTGMLPTLISDTAQVMAEAIEATRAAIAQGVPGVLGIHLEGPYLSPARKGTHDEHKFRLPDAHEI
AVDTSLDNGVTLITLAPERVPLDDIRAFVAGGAIVFAGHTAATYEQARDGIAAGVSGFTHVYNAMSQLAGREPNAVGAAL
EDPNVWCGVIVDGVHVHPASLRVALAAKPRGKLLLVTDAMPMVGSDSPGFDLYGETITALDGVVRNADGALAGSALDMAT
AVRNSVRWLGVDLAEAARMASTYPAQCIGLGERLGRIAPGYQADLVLVDADVQVLGTWIAGQRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-55 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-55 41
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO_3695 YP_452724.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 8e-56 41