Gene Information

Name : XOO_3635 (XOO_3635)
Accession : YP_452664.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : riboflavin-specific deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 4111642 - 4112751 bp
Length : 1110 bp
Strand : -
Note : 5-amino-6-uracil reductase; identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGAGTGAGACCGCGGCGATCGCGAGTGCCGATGACCACCGCTGGATGGCGCAGGCGTTGCGCTTGGCCGAGCGCGGCGC
CTACACCACCCGCCCCAATCCGATGGTGGGCTGCGTGATTGTGCGCGATGGCGTGTGCGTGGGCGAAGGCTTTCATCAAC
GTGCGGGTGGCCCGCATGCCGAAGTCTTCGCGTTGCGTGCGGCCGGTGAGTTGGCGCGCGGTGCCACTGCGTATGTGACC
CTGGAGCCATGCGCGCATTACGGGCGCACGCCGCCGTGTGCGTTGGCGTTGATCGAGGCAGGCGTAACGCGTGTGGTCGC
GGCGATGGCCGATCCGTTTCCGCAGGTCAATGGCGGTGGTTTTGCGTTGCTGCGCGACGCTGGAATCGAGGTGCTCAGCG
GGGTGATGCACGCGCAGGCGCGCACGCTCAATCAGGGCTTTCTGTCGCGGGTGGAGCGTGGCCGGCCGTGGCTGCGGGTC
AAACTGGGCGCCAGCCTTGACGGGCGGACCGCGTTGGCCAGCGGCCAATCCAAATGGATCACCGGAGCCGACGCGCGTGC
GGACGTGCAGCGTTGGCGTGCGCGTGCCGGCGCAATCCTCACTGGTGCTGGCACGGTGTTGGCCGATGATCCGTCGATGA
CGGTGCGGCTGGGCGATGACATCGCGTGCGTGCCACCGCTGCGTGTGGTGCTGGATGCCGGCTTACGCACGTTGGCGTGC
AAGAACATCCGCAATGGCGATGCGCCGACGCTGTATCTGCATGGCGATGCTGTCGCTGCAACCGCGCTGGATGGTGCGGA
ATGTGCGGCACTGCCATTGCACGTGGGCCGTTTCGATCTGTCCGCAGTGCTGGCGTTGCTGGCCGAGCGCGGCATCAATG
AAGTGCATGTTGAAGCCGGCGCCACGCTGAGTGGTGCGCTGTTGCAGGCCGGGCTGGTGGACGAACTGCTGGTCTACATG
GCGCCGGTGTTGCTGGGCGACACCGCAAGGCCCTTGCTCGCTGGCCTTGGCATCGAAACGATGGCTCAGCGCTACGAATT
GCAACTACGCGATGTACGTCAGCTCGGGCAGGATCTGCGTTTGCGTTACGCGCCATCAGCGGTGGTATGA

Protein sequence :
MSETAAIASADDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGELARGATAYVT
LEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGFALLRDAGIEVLSGVMHAQARTLNQGFLSRVERGRPWLRV
KLGASLDGRTALASGQSKWITGADARADVQRWRARAGAILTGAGTVLADDPSMTVRLGDDIACVPPLRVVLDAGLRTLAC
KNIRNGDAPTLYLHGDAVAATALDGAECAALPLHVGRFDLSAVLALLAERGINEVHVEAGATLSGALLQAGLVDELLVYM
APVLLGDTARPLLAGLGIETMAQRYELQLRDVRQLGQDLRLRYAPSAVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 5e-63 51
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 5e-63 51