Gene Information

Name : XOO_3623 (XOO_3623)
Accession : YP_452652.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.12
Position : 4099165 - 4101213 bp
Length : 2049 bp
Strand : -
Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

DNA sequence :
ATGTCTACGATCGATACGACTGAAAAACGCGAGCGCGGTGACGCAGCGTTGTTCGATGCCGCCGTACTGGTTGCGGCGAT
GCGTGCTGCCTTCGGCAAGTTGGCACCGCGGCATCTGTTGCGCAGCCCGGTGATGGCGGTGGTGATGGGCGGCACGGTGC
TGGCAGCGGTGATCACCGCCAGCGGGCATGCGCATGCCGGCTTCGGCTGGGCGGTGACGGCGATTTTGTTCGTCACCGTG
TTGTTCGGCAATTTTGCCGAAGCCATTGCCGAGGCGCGTGGCCGCGGCCAGGCCGCCTCGTTGCGGCGGGCGCGCAAGGA
CCTGGTGGCACGCCGGGTGGAAACCGCACTGGGTGGCCGCGAAACCCGCGTGCCGGCGGCAGAACTGCGCCCGGGCGATT
ACGTCATGGTGTCCGAAGGCGAATTCGTACCGGCCGATGGCGAGATCGTGCGTGGTGTTGCCACCATCAACGAAGCAGCG
GTGACCGGTGAATCGGCACCGGTGTTGCGCGAGGCCGGCACCGACCGCAGCGGCGTCATCGGTGGCACGCGCGTGCTCTC
CGACGAGATCGTGTTCAAGGTCACCGCCGAGCCGGGGCACAGCTTTCTCGATCGCATGATCGCGTTGGTGGAAGGCGCCA
ATCGGCAGAAGACGCCGAACGAGATCGCGCTGACCTTGTTGCTGGCCGCGATGACGCTGACGTTTTTGATCGTGGTGGCG
TCGTTGCCGGCAATTGCGGGCTTTGTCGGCGTCACGCTGGATCCGCTGCTGCTGATCGCGTTGCTGGTGTGCCTGATCCC
GACCACCATCGGCGGGCTGTTGCCGGCAATTGGTATCGCCGGTATGAACCGCGCGCTGTCGGCCAATGTGTTGGCCAAAT
CCGGCAAGGCAGTGGAAGTGGCCGGCGACGTGGATGTGCTGCTGCTCGACAAGACCGGCACCATTACCTATGGCGACCGC
CAGGCCACCGCATTCCATCCCCTGGCTGGCGTCGATCGCGCACAACTGCGCGATGCGGCCATGCTTGCCTCGCTGGCCGA
TCCGACGCCGGAAGGGAAATCCATCGTCAAGCTGGCGCGTCAGCAAGGTGCCGTCGCAGTGGAGGCCGAGGGTGCGCATT
TCATCGCGTTCACCGCACAGACGCGCATGTCCGGTGTCGATCTTGGCGGGCGCAGCATCCGCAAGGGCGCCGGCGATTCG
ATCGTGGCGTATGTGCAGGGCATGGGCGCCACGGTGTCGCCCGAATTGCAGGGCCGTATCGAAGAAGTGGCGCGTGGCGG
CGCCACACCGTTGGTGGTGGCCGAAGGCCGCCATGTGCTCGGTGTGGTCGAGTTGAGCGACGTGGTCAAGCAGGGCATCA
AGGAAAAGTTCGCGCAGTTGCGTGCGATGGGCATCAAGACGGTGATGATCACCGGCGACAACCCGCTCACCGCTGCCGCG
ATTGCTGCCGAAGCCGGTGTGGACGACTACATCGCCCAGGCACGTCCGGAAGACAAGCTGGCACGCATCCGGGCCGAGCA
GACGGGCGGGCGGTTGGTGGCGATGGTCGGCGACGGCACCAACGACGCACCGGCGCTTGCGCAGGCCGACGTGGGTCTGG
CGATGAACTCCGGCACGCAAGCCGCCAAGGAAGCCGGCAACATGGTGGATCTGGATTCGGATCCGGCCAAGCTGCTGGCG
GTGGTGGAAGTGGGCAAACAGCAGTTGATTACGCGCGGTGCGTTGACCACGTTCTCGCTGGCCAACGACGTTTCCAAATA
CTTCGCGATCCTGCCGGCGCTGTTTGCTGCCGCCATCCCGTCGATGACAGCGCTCAACGTGATGCAGCTCTCCAGCCCGC
GCCATGCGGTATTGGCGGCGTTGATCTTCAATGCGTTGATCATTCCGGCATTGATTCCGCTGGCATTGCGCGGCGTCCGT
TTTCGTCCTTCCAGCGCCACCGCGCTGTTGCGCCGAAACATGTTGATCTACGGCGTGGGTGGCGTGTTGCTGCCGTTCGT
TGCGATCAAAGTGATCGATCTGGTGCTGGTCGCCGTCTTCGGTGTCTGA

Protein sequence :
MSTIDTTEKRERGDAALFDAAVLVAAMRAAFGKLAPRHLLRSPVMAVVMGGTVLAAVITASGHAHAGFGWAVTAILFVTV
LFGNFAEAIAEARGRGQAASLRRARKDLVARRVETALGGRETRVPAAELRPGDYVMVSEGEFVPADGEIVRGVATINEAA
VTGESAPVLREAGTDRSGVIGGTRVLSDEIVFKVTAEPGHSFLDRMIALVEGANRQKTPNEIALTLLLAAMTLTFLIVVA
SLPAIAGFVGVTLDPLLLIALLVCLIPTTIGGLLPAIGIAGMNRALSANVLAKSGKAVEVAGDVDVLLLDKTGTITYGDR
QATAFHPLAGVDRAQLRDAAMLASLADPTPEGKSIVKLARQQGAVAVEAEGAHFIAFTAQTRMSGVDLGGRSIRKGAGDS
IVAYVQGMGATVSPELQGRIEEVARGGATPLVVAEGRHVLGVVELSDVVKQGIKEKFAQLRAMGIKTVMITGDNPLTAAA
IAAEAGVDDYIAQARPEDKLARIRAEQTGGRLVAMVGDGTNDAPALAQADVGLAMNSGTQAAKEAGNMVDLDSDPAKLLA
VVEVGKQQLITRGALTTFSLANDVSKYFAILPALFAAAIPSMTALNVMQLSSPRHAVLAALIFNALIIPALIPLALRGVR
FRPSSATALLRRNMLIYGVGGVLLPFVAIKVIDLVLVAVFGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 7e-126 54
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-125 54
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-125 54
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-125 54
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-125 54
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 7e-126 54
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 4e-128 54
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 3e-128 54