Gene Information

Name : XOO_3564 (XOO_3564)
Accession : YP_452593.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : nucleoside transporter
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 4026485 - 4027783 bp
Length : 1299 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGGTCGAAGGTTTGGGAAGGATCGGTTTCGGCCTGTTCGGTCTGGCGGTGCTCATCGGCATCACCTGGCTGTTTTCGAA
CAATCGCCGCGCGATCGACTGGAAGCTGGTCGCCACCGGTCTGGCCTTGCAGATCTCGTTCGCCGCATTGGTGTTGCTGG
TGCCGGGCGGGCGCGAGGTGTTCGATGCGCTGGGCAAGGGCTTCGTCAAGGTATTGAGTTTCGTCAATGCAGGATCCGAC
TTCATTTTCGGCAACCTGATGAACATCGACAGCTACGGCTTCATTTTTGCGTTCCAGGTGCTGCCCACCATCATCTTCTT
CTCGGCACTGATGGGCGTGCTCTATCACCTCGGCGTGATGCAGGTGGTGGTGCGTGCGATGGCGTGGGCGATCACCAAGG
TGATGCGCGTGTCCGGTGCGGAAACCACCAGCGTGTGCGCCAGCGTCTTCATCGGCCAGACCGAAGCGCCGCTGACGGTG
CGCCCGTACATCCCCAAGATGACCCAGTCCGAGCTGCTGACGATGATGATCGGCGGCATGGCGCATATCGCCGGCGGCGT
GCTGGCCGCCTACGTCGGCATGCTCGGCGGCAGCGATCCTGCGCAGCAAGCGTTTTATGCCAAGCATCTGCTGGCCGCCA
GCATCATGGCCGCGCCCGCCACACTGGTGGTCGCCAAGCTGCTGATGCCGGAAACCGTCACCCCGCTGACCCGCGGCACG
GTCAAGATGGAAGTGGAAAAAACCACCAGCAATGTGATCGATGCGGCTGCGGCCGGTGCCGGCGACGGCTTGCGCTTGGC
GCTGAACATCGGCGCGATGCTGCTGGCCTTCATTGCGCTGATCGCGCTGATCAACGCACCGCTGACCTGGCTGGGCGACG
TCACCGGCGCCGCCGCGCTGCTCAGCCGCCCGACCAACCTGTCGACGATCTTCGGTTACGTGCTGGCGCCGATCGCCTGG
GTGATCGGCACTCCGTGGGTGGATGCGACCACAGTGGGTTCGTTGATCGGCCAAAAAGTGGTGATCAACGAGTTTGTTGC
TTACAGCGAGTTGTCGCGCATCGTGAAGGGCGAAGTCCCGGGCGCGGGCCTGAGCGCTGAAGGCCGCCTGATTGCCACCT
ACGCGTTGTGCGGCTTCGCCAACTTCAGTTCGATCGCGATCCAGATTGGCGGGATCGGCGGGCTGGCGCCAGAACGCCGT
CACGATCTGGCCAAGTTCGGCCTGCGCGCAGTGCTCGGCGGTTCGATCGCCACCTTCATGACCGCTACCATTGCCGGCGT
GCTGTCGCATTTCGGTTAA

Protein sequence :
MVEGLGRIGFGLFGLAVLIGITWLFSNNRRAIDWKLVATGLALQISFAALVLLVPGGREVFDALGKGFVKVLSFVNAGSD
FIFGNLMNIDSYGFIFAFQVLPTIIFFSALMGVLYHLGVMQVVVRAMAWAITKVMRVSGAETTSVCASVFIGQTEAPLTV
RPYIPKMTQSELLTMMIGGMAHIAGGVLAAYVGMLGGSDPAQQAFYAKHLLAASIMAAPATLVVAKLLMPETVTPLTRGT
VKMEVEKTTSNVIDAAAAGAGDGLRLALNIGAMLLAFIALIALINAPLTWLGDVTGAAALLSRPTNLSTIFGYVLAPIAW
VIGTPWVDATTVGSLIGQKVVINEFVAYSELSRIVKGEVPGAGLSAEGRLIATYALCGFANFSSIAIQIGGIGGLAPERR
HDLAKFGLRAVLGGSIATFMTATIAGVLSHFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 1e-46 41