Gene Information

Name : XOO_3558 (XOO_3558)
Accession : YP_452587.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 4019962 - 4020789 bp
Length : 828 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGTCGGCGCCATTGTTGCAAGTCGATCACGTCAGCCTGGAATCCGCCTCCGCGCAACGCGTGGTGCGGGCCACCCACGG
CGTGCGCTTCGATGTGCATGAGGCCGATCGTTTCGTGCTGCTAGGGCCATCGGGCTGCGACAAATCCATCTTGCTCAAGG
CGGTTGCCGGTTTCGTTGCACCGCGCAAAGGACAGGTCCGTCTGGAGGGTCATGCGGTCAGCGGGCCGGGGCCAGACCGG
GTCGTGGTGTTCCAGGAATTCGACCAACTTGCGCCATGGAAAACCGTGCGCGAGAACGTGGTGTTCGGCCTGCGCGCAGC
GCGCAAGCTCGGCCGCGGCGAAGCCCGGGAGCGGGCAGACGAGAGCTTGGCCCAGGTCGAGCTGAGTGCGTTCGCCGATG
CCTATCCGCATACCTTGTCCGGCGGGATAAAACAGCGTGTGGCGATCGCACGCACACTGGCGATGCGCCCGCGCGTGCTG
CTGATGGACGAACCGTTCGCGGCACTGGATGCGCTGACGCGTTCGCGCATGCAGGAGCAGGTACTGGAATTGTGGGAACA
ATTACGGTTCACGCTATTGTTCGTGACCCATTCCATCGAAGAAGCACTGGTGGTCGGTAACCGCGTCTTGCTGTTGTCGC
CGCACCCGGGCCAGGTGCGCGCCGAGCTCAACGCGCATGCCTTCGGCCCGCACAGCGCCGGTAGCGTGGCGTTCCAGCAG
ACCGCGCAACGCATTCACCGGCTGCTCTTCGACGTGCCCGATGAGACGCTGGAGACGACAAGGTGGCACCGTTACGCCGC
CCCTCCGTGCGCCGTCGTGAGGCGCTGA

Protein sequence :
MSAPLLQVDHVSLESASAQRVVRATHGVRFDVHEADRFVLLGPSGCDKSILLKAVAGFVAPRKGQVRLEGHAVSGPGPDR
VVVFQEFDQLAPWKTVRENVVFGLRAARKLGRGEARERADESLAQVELSAFADAYPHTLSGGIKQRVAIARTLAMRPRVL
LMDEPFAALDALTRSRMQEQVLELWEQLRFTLLFVTHSIEEALVVGNRVLLLSPHPGQVRAELNAHAFGPHSAGSVAFQQ
TAQRIHRLLFDVPDETLETTRWHRYAAPPCAVVRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-39 42