Gene Information

Name : XOO_0349 (XOO_0349)
Accession : YP_449378.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 377195 - 377395 bp
Length : 201 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGAACAGCCGCGTGCGCGAATTGCGCGAGGCCAGTGGCTGGTCGCAAGGCGAGTTGGGCGAACGGCTGGGTGTATCGCG
GCAGACGATCAATGCGCTGGAAACCGGTAAATACGATCCCAGCCTGCCGTTGGCGTTTCGGATCGCACGTTTGTTTGGGG
AGTCGATCGAGCATGTTTTTCTTTACGAAGACGCGCAGTAG

Protein sequence :
MNSRVRELREASGWSQGELGERLGVSRQTINALETGKYDPSLPLAFRIARLFGESIEHVFLYEDAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-11 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-06 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-06 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO_0349 YP_449378.1 transcriptional regulator VFG2168 Protein 1e-06 45
XOO_0349 YP_449378.1 transcriptional regulator VFG2175 Protein 1e-06 45