|
Name : XOO_3028 (XOO_3028) Accession : YP_452057.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : ISXoo3 transposase orfA Function : - COG functional category : - COG ID : - EC number : - Position : 3432199 - 3432414 bp Length : 216 bp Strand : + Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker; truncated DNA sequence : GTGAAGAAGCGTTTTTCCGAAGAACAGATCATCGGCTTCCTGCGGGAAGCCGATGCGGGCATAGCGATCAGGGACCGGTG CCGGCGGCATGGCTTCAGCGAGGCCTCGTACTATGTGTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGC GGCTCAAGGACCTCGAGTCCGAGAACGCGCGGCTGAAGAAGTTGCTGGCCGAGTAA Protein sequence : MKKRFSEEQIIGFLREADAGIAIRDRCRRHGFSEASYYVWRSKFGGMSVPDAKRLKDLESENARLKKLLAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01522.1 | transposase A | Not tested | PAGI-1 | Protein | 9e-24 | 72 |
| unnamed | ABR13351.1 | insertion sequence IS407 OrfA | Not tested | PAGI-5 | Protein | 4e-24 | 72 |
| unnamed | ABR13539.1 | insertion sequence IS407 OrfA | Not tested | PAGI-8 | Protein | 4e-24 | 72 |
| EXA9 | ABD94680.1 | IS407 transposase OrfA | Not tested | ExoU island A | Protein | 3e-24 | 72 |
| trp1400A | CAB46581.1 | IS1400 transposase A | Not tested | HPI | Protein | 2e-15 | 52 |
| XCV0438 | YP_362169.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 3e-13 | 46 |
| tnp | AAL78293.1 | putative truncated transposase | Not tested | Hrp PAI | Protein | 2e-13 | 46 |
