Gene Information

Name : XOO_3028 (XOO_3028)
Accession : YP_452057.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : ISXoo3 transposase orfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3432199 - 3432414 bp
Length : 216 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker; truncated

DNA sequence :
GTGAAGAAGCGTTTTTCCGAAGAACAGATCATCGGCTTCCTGCGGGAAGCCGATGCGGGCATAGCGATCAGGGACCGGTG
CCGGCGGCATGGCTTCAGCGAGGCCTCGTACTATGTGTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGC
GGCTCAAGGACCTCGAGTCCGAGAACGCGCGGCTGAAGAAGTTGCTGGCCGAGTAA

Protein sequence :
MKKRFSEEQIIGFLREADAGIAIRDRCRRHGFSEASYYVWRSKFGGMSVPDAKRLKDLESENARLKKLLAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 4e-24 72
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 4e-24 72
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-24 72
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 9e-24 72
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-15 52
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 3e-13 46
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 2e-13 46