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Name : XOO_2940 (XOO_2940) Accession : YP_451969.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : ISXoo6 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 3325058 - 3326041 bp Length : 984 bp Strand : + Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGCAACTGACCTTCGGAGACGCGGAGTACAACGGCAAGCGCAAGCGGACGCGGCGTGAGGTGTTTTTGGCCGAGATGGA TCAGGTCGTGCCATGGAAGGGCCTGCTGGCGCTGATCGAGCCGCACTATCCAAAGTCGGGGCAGCCGGGGCGACAGCCGT ATCGGCTGGAGACGATGCTGCGCATCCACTTTTTGCAGCAGTGGTATGCGCTGAGCGATCCCTCGGCGGAAGAAGCGCTG TACGACACGGTGTCGATGCGCCGCTTCGCGAAGATCGGCGGGCTGGACGAGGTGCCGGATGAAACGACGATTCTCCACTT CCGGCATCTGCTGGAGCGGCATGATCTGGCGCGCAAGCTGTTCAACCGGGTCAACGCGCACCTGTCGCGTAAAGGGCAGA GTCTGCGGGGCGGGACGATCGTGGATACCACGATCATTGCGGCGCCCAGTTCGACCAAGAACAAGCAGGGCGAGCGCGAT CCGGACATGCACCAGACCAAGAAGGGGAATCAATATGACTTCGGGATGAAGGCGCACATCGGGGTGGACGATGACTCCGG GCTGGTGCACCACGTCGAATGCACGGCGGCCAACGTGGCCGATATCACGCAAGCGCACAAGCTGCTGCACGGCAAGGAAG ACACGGTGTGCGGGGACAGCGGCTACACCGGGCTTGAGAAGCGCGAGGAAATGAAGCGCAAGCGCACGCTGCGCTACCTG ATCGCCGAGAAACCCTCGAAGCTGAAGCAGATCAAGAACAAACGCGAACTGAAGTTGGCCAAGCGCTGGGAGCACACCAA GGCCAGCCTGCGGGCGAAGGTGGAACACCCGTTCCGGGTGATCAAGCGTCAGTTTGGTTACGTCAAGGTGCGCTATCGCG GCCTGGTCAAGAACACCGCGCAGATGCTAACGCTGTTTGCGTTGTCGAATCTGTGGCTGAAGCGCAAAGAGTTAATGCCC GCTGCGGGGAAGGTGTGCCTGTAA Protein sequence : MQLTFGDAEYNGKRKRTRREVFLAEMDQVVPWKGLLALIEPHYPKSGQPGRQPYRLETMLRIHFLQQWYALSDPSAEEAL YDTVSMRRFAKIGGLDEVPDETTILHFRHLLERHDLARKLFNRVNAHLSRKGQSLRGGTIVDTTIIAAPSSTKNKQGERD PDMHQTKKGNQYDFGMKAHIGVDDDSGLVHHVECTAANVADITQAHKLLHGKEDTVCGDSGYTGLEKREEMKRKRTLRYL IAEKPSKLKQIKNKRELKLAKRWEHTKASLRAKVEHPFRVIKRQFGYVKVRYRGLVKNTAQMLTLFALSNLWLKRKELMP AAGKVCL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 2e-97 | 63 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 8e-71 | 59 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 1e-70 | 59 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 3e-58 | 55 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 2e-57 | 46 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 2e-57 | 46 |
