Gene Information

Name : XOO_2906 (XOO_2906)
Accession : YP_451935.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3285240 - 3285875 bp
Length : 636 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence : 
ATGCCGGTGTTCGATTTCATTCCGCCGGCAGCAGCGCACACGATGCATCTCCGGTGCAAGGGGGACGCCTTTGCCACATG
GCCGCTGCAACCGCAGCGTCCAGCAACCACGCAGATCATCGGAGGCCGCATGTCCGTTCGCAGCAGCAGTCAGAAGTTCA
TTGCCAGAAATCGCGCGCCTCGCGTGCAGATCGAGTACGACGTCGAGATTTACGGCTCGCAGAAAAAGGTGCAGGTTCCG
TTCGTCATGGGTGTGTTGTCGGATCTGTCCGGCGCCAATACCGAACACCTGCCGGCGCTGGAAGCACGCGAGGCAGTGGA
AATGGATGTCGACAATTTCGACAGCCGGCTGCGTGCCATGCAACCGCGCGTGGCCATGAGCGTTTCCAATACGCTCACCG
GCAGCGGCGAGTTACCGGTCGATATCACCTTCGACAGCCTGGACGATTTTTCGCCCACCGCGGTCGTGAAAAAGGTGGCA
CCGCTGGCCGAGCTGCTGGAAGCACGTACCCAGCTGGCCAATCTAGGCACTTACCTTGACGGCAAAGCCGGCGCCGAGCG
CTTGATCGCCGATGCGATCAAGGATCCCACCCTGCTGCGTTCGCTGGTCGCGGCTCCCAAGTCGAAGGATGCGTAA

Protein sequence : 
MPVFDFIPPAAAHTMHLRCKGDAFATWPLQPQRPATTQIIGGRMSVRSSSQKFIARNRAPRVQIEYDVEIYGSQKKVQVP
FVMGVLSDLSGANTEHLPALEAREAVEMDVDNFDSRLRAMQPRVAMSVSNTLTGSGELPVDITFDSLDDFSPTAVVKKVA
PLAELLEARTQLANLGTYLDGKAGAERLIADAIKDPTLLRSLVAAPKSKDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-51 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO_2906 YP_451935.1 hypothetical protein VFG2069 Protein 6e-53 66