Gene Information

Name : XOO_2880 (XOO_2880)
Accession : YP_451909.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : IS1113 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 3250927 - 3251712 bp
Length : 786 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker; truncated

DNA sequence :
GTGACCGATGCCGTGGTCGATGAGGTGAAGGCCTGGCAGAGCCGGGCGCTGGATCCGGTGTACCTGATCGTCTCCATCGA
CTGCATTCACGTCAAAGTACGCGAGGGCGCGGTGCGGGTGAAGGCGGTCTACCTGGCCATCGGCATCACGATGGCTGGCC
AAAAGGAGGTGCTGGGCCTGTGGCTGGCCCAGACCGAGGGTGCGAAGTTCTGGATGCAGGTGGTGACGGAGCCGCGCAAC
CGCGGCGTGCAGGACATCTTCATCGCCTGCGTCGACGGCCTGAAGGGCTTCCCCGAAGCGATTGAGGCGGTGTTCCCACA
GACGACGGTGCAGCTGTGCATCGTGCACATGGTGCGGAACAGCTTGAACTACGTGTCGTGGAAGCGGCGTCCGGAGGTGG
CGGCCGCCCTCAAGCGCATCGACACCTGCGCCACCGCCGAGGAGGCCGAGCTGCGGTTTACCGAGTTCCAGGAGCGCTGG
GACGACGCGTATGCGCCGATCGGTCAGTCATGGCGGCGCAACTGGCCGTGCCTGGTCCCGTTCTTCGACTACCCACCGCA
GATCCGCAAGGTGATCTACACCGCCAACGCCATCGAGTCGGTGCACTACGGCCTGCGCAGGCTGACCAAGCACCGCGGTG
CCTTCCCCAGCGATGAGGCGCTGATCAAGCTGCTCTCCCTGGCCCTGCGCAACATCAGCAAGCGGTGGACGTTGCCCATC
CGCGATTGGAAGGCCGCGCTTAACCGCTTTACCATCCAGTTCGAGGAGCGTATCCCTCAGCTGTAA

Protein sequence :
MTDAVVDEVKAWQSRALDPVYLIVSIDCIHVKVREGAVRVKAVYLAIGITMAGQKEVLGLWLAQTEGAKFWMQVVTEPRN
RGVQDIFIACVDGLKGFPEAIEAVFPQTTVQLCIVHMVRNSLNYVSWKRRPEVAAALKRIDTCATAEEAELRFTEFQERW
DDAYAPIGQSWRRNWPCLVPFFDYPPQIRKVIYTANAIESVHYGLRRLTKHRGAFPSDEALIKLLSLALRNISKRWTLPI
RDWKAALNRFTIQFEERIPQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67403.1 putative transposase Not tested PAI II CFT073 Protein 6e-51 50
c5176 NP_757024.1 transposase Not tested PAI II CFT073 Protein 4e-51 50