Gene Information

Name : XOO_2878 (XOO_2878)
Accession : YP_451907.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : ISXoo3 transposase orfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3250207 - 3250443 bp
Length : 237 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker; truncated

DNA sequence :
TTGATAAGCTTCCTGCACGAAGCCGACGCCGGGGTCTCCATCAAGGACCTATGTCGTCTCCATGGTTTCAGCGAAGCCTC
CTACTCCCTGTGGCGCAGCAAGTTCGGCGGGATGAGCGTGCCGGAGGCCAAGCGGCTCAAGGAGCTGGAGGCGGAGAACA
CGCGGCTGAAGAAGCTGCTGGCCGGGCAGCTGTTCGAGAACAATCTGATCAAGGATGCGCTGCGAAAAAAGTGGTGA

Protein sequence :
MISFLHEADAGVSIKDLCRLHGFSEASYSLWRSKFGGMSVPEAKRLKELEAENTRLKKLLAGQLFENNLIKDALRKKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 5e-18 56
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-18 56
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 6e-18 56
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 5e-18 56
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 4e-12 43