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Name : XOO_0260 (XOO_0260) Accession : YP_449289.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : ISXo1 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 283799 - 284767 bp Length : 969 bp Strand : + Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGCAACTGACGTTCGGTGACGCCGAGGGCCTGGGCAAGCGCAAGCAGACCCGGCGCGAGATCTTCCTTGCGGAGATGGA GCGCATCGTGCCGTGGAAGCGACTGCTTGCCCTGATCGAGCCGCACTATCCGGTGTCAGGACGACCGGGTCGGCAGCCGT ACGCGCTGGCGAGGATGTTGCGGATTCATCTGTTGCAGCAGTGGTATGCGTTGAGCGATCCGGCGATGGAAGAGGCATTG CACGAGATCCCGACCCTGCGGCGTTTTGCCCAGCTCGGCGGCTTGGATAACGTTCCAGACGAGACCACGATTCTCAACTT TCGCCGTTTGCTGGAAACCCACGCCATTGCCGCTCGGATGCTGGAAGCGGTCAACGCCCATTTGTCGCGCAAGGGGCAGA GCCTGCGGTCGGGCACGATCGTCGATGCGACGCTGATCGCTGCGCCCAGTTCGACCAAGAATGCCGATCGTGCGCGCGAC CCTGAGATGCATCAGACCAAGAAGGGCAACCAGTGGTATTTCGGGATGAAGGCGCACATTGGGGTGGATGAATTTTCCGG GCTGGTACACCACGTGCAGTGCACCGCAGCCAACGTGGCCGATGTCACGGTGACGCACGCATTGCTGCACGGCAAGGAAG ACAGCGTGTTCGGCGACAGCGGCTACACCGGTGCGGAAAAACGCGACGAGTTGCAGAGCTGCGAGGCTGCATTTTTCATT GCCGCCAAGCGCTCCACGATTCAAGCCATTGGCAACAAGCGCGCGCGTGCTTGGGCAGAACGTTGGGAACACTTCAAGGC AAGCGTGCGCGCGAAGGTGGAGCACCCATTCCGGGTGATCAAGCGGCAGTTCGGCTACACCAAGGTGCGCTATCGCGGCC TGGCCAAGAACACCGCACAGGTGCAGACGTTATTTGCGCTGTCGAATCTGTGGATGGTGCGCCGGCACTTGCTGCCGGCC AGGGGATAA Protein sequence : MQLTFGDAEGLGKRKQTRREIFLAEMERIVPWKRLLALIEPHYPVSGRPGRQPYALARMLRIHLLQQWYALSDPAMEEAL HEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHAIAARMLEAVNAHLSRKGQSLRSGTIVDATLIAAPSSTKNADRARD PEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVQCTAANVADVTVTHALLHGKEDSVFGDSGYTGAEKRDELQSCEAAFFI AAKRSTIQAIGNKRARAWAERWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVQTLFALSNLWMVRRHLLPA RG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 9e-93 | 66 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 8e-71 | 63 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 6e-71 | 63 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 4e-54 | 53 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 6e-60 | 48 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 6e-60 | 48 |
