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Name : XOO_2055 (XOO_2055) Accession : YP_451084.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Virulence Product : epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2273075 - 2274982 bp Length : 1908 bp Strand : + Note : dehydratase; identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGATTTCCTCGCGTGACCGTTTGACCAAGGCCCTGCCGCAGATAGCGGTCGTGGTACACGACCTATTGATGGTGTGGGT GTGCTGGCAGCTACTGCACGCCGGCCGCTATTCCATGTTGCGCCAGGCGCCGGATCTGCCGCTGTGGGATTGGCGCACCG GGGTGGTGTTGGTGGCGCAGGGTCTGGTGTTCTGGAAGATGGGGTTGTACCGCGGACTGTGGCGCTTCGCCTCGGTGCCG GACCTATGGAACATCTTCAAGTCGAGTTTCCTCGGCCTGGTCGCGATCGTGCTCGCGTTGTCGTACGACCGCCTGGATCG CGTGCCGTTGTCGGTGCTGGTGGTCTATCCGTTCGCGTTGTCGGCCATGCTGGGTACGCCGCGTTTGCTGTATCGCGCTT GGAAGGACTACCAGATCACGCATTCCGGTGATGCCGGGCAGCGCGTGCTGATCCTTGGAGCAGGGCGTGCTGCCGAAGGT TTGGTACGCGATCTGCGCCGTACTGGCGCGTTTGTGCCGATTGGTTATCTGGACGACGCCAACAACCTGCACGGCGCCAA GATCCAGGGTCTCAATGTGCTGGGCAATCTGGATCAAGCTGCTGCGATTGCCAAAGAAACTGCCGCCAAGCTGCTGGTCA TCGCGATCCCATCGCTGGATGCCTCCGGCATGCAGCGCGTTGTGGCGATCTGCGAAAGCACCGGCCTGCCGTTCCGCATG GTGCCCAAGCTGATCAACGTCCTGGAAGGGCGCTCGTTGCCGGGCGAGTTGAAGGAGGTCGCGATCGAGGATTTGCTCAA CCGCAAGCCGGTCACGCCCGACTGGCGCCTGATCCGCGACTGGCTGACCAACAAGACTGTGATGGTGACCGGCGCCGGCG GTTCGATCGGCTCGGAAGTCTGCCGCCAGTGCGCCCGTCACGGAGCGCGCCGGATCGTACTGTTGGAGATCGACGAGTTG GCGTTGCTGACCATCGACTCGGATCTGCGTCGGCTATTCCCGGATATCGAAGTGGTGCGCGTACTCGGCGATTGCGGCGA CCCGGCAGTGGTTGCGCATGCGCTGAACACCGCGACCCCGGATGCGGTGTTTCACGCTGCCGCTTACAAGCAGGTGCCGC TGCTGGAAGAGCAATTGCGCGAGGCGGTGCGCAATAACGTGCTGGCAACCGAGAACGTGGCGCGCGCCTGCCAGCGTGCA CGCATCGAAACCTTCGTCTTCATTTCTACCGATAAGGCGGTCGAGCCGGTCAACGTGCTGGGCGCAAGCAAGCGCTATGC AGAAATGATCTGCCAGAGCCTTGACGCGCGCGATGCGCCGACGCGCTTCATCACCGTGCGCTTCGGCAACGTGCTGGATT CGGCAGGCAGCGTGGTGCCATTGTTCCGCGAACAGATCCGTCAGGGCGGCCCGGTCACGGTGACGCATCCGGACGTGACG CGTTACTTCATGACCATCCCCGAAGCCTGCCAGTTGGTGATCCAGGCAGCGGCGTCTGCATCGCATGGTGCGATCTATAC GCTGGACATGGGGGAGCCTGTGCCGATTCGCCTGCTGGCCGAGCAGATGATCCGTCTGGCCGGCAAGCAGCCGGGCAAGG ACGTGGCGATTCTCTACACCGGCTTGCGTCCGGGCGAGAAGCTGCACGAGACGCTGTTCTATTCCGACGAAGACTATCGC CCCACCGCGCACTCCAAAATTCTCGAAGCCGGTGTGCGCGAGTTCTCGCATGAGCAAGTGCTGCAGCTGGTGACGCGCTT GCGCGAGGCCGTTAACCGCTATGACATCAACGCGATGGAGACGGTGCTGGGCAGTCTGATGCCGGATTTCGCGGCTGCTC GACGGAAAGTCGACGCGCGATCTGATACGGTCGTTCCATTCCCCGCACGTGAGGTCAGAAGACTGTAA Protein sequence : MISSRDRLTKALPQIAVVVHDLLMVWVCWQLLHAGRYSMLRQAPDLPLWDWRTGVVLVAQGLVFWKMGLYRGLWRFASVP DLWNIFKSSFLGLVAIVLALSYDRLDRVPLSVLVVYPFALSAMLGTPRLLYRAWKDYQITHSGDAGQRVLILGAGRAAEG LVRDLRRTGAFVPIGYLDDANNLHGAKIQGLNVLGNLDQAAAIAKETAAKLLVIAIPSLDASGMQRVVAICESTGLPFRM VPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIGSEVCRQCARHGARRIVLLEIDEL ALLTIDSDLRRLFPDIEVVRVLGDCGDPAVVAHALNTATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRA RIETFVFISTDKAVEPVNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTHPDVT RYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVAILYTGLRPGEKLHETLFYSDEDYR PTAHSKILEAGVREFSHEQVLQLVTRLREAVNRYDINAMETVLGSLMPDFAAARRKVDARSDTVVPFPAREVRRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-73 | 42 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-79 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XOO_2055 | YP_451084.1 | epimerase | VFG1300 | Protein | 5e-76 | 43 |
