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Name : XOO_1999 (XOO_1999) Accession : YP_451028.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2210008 - 2210856 bp Length : 849 bp Strand : + Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker; truncated DNA sequence : GTGATCCAGCAGATGATCCAGCAGTGGCAGGAGAAGGCCAGAACCGCCCGGCTGTGCCGGTTGCTGGGGGTGAGTCGTTC GGGGGTGTATGCGGCGCGCCGACGGCGACCGGCTCCACGCGCTGATGTACTTGCGGCAGCGGTGCAGACGGCCTTCCAGG CCAGCGGCGGCAACTATGGCAGCCGTCGATTGAGCGCCAGCCTGAAGGCCCAGGGCCTGCCCGCTGGTCGCCACCGGGTC CGCCGCCTGATGAAGCGCCACGGGCTGAAGGCGCGCTGGAAACGCAAGTTCACCCACACCACCGACAGCCGGCACGACTT GCCTGTGGCGGCCAACGTTCTGGATCGGCGCTTCAAGCCCAGTGCTGCGGACCAAGCCTGGGTGGCCGACATCACCTACA TCCGCACCGAGCGCGGCTGGCTGTATCTGGCCGCCGTGCTGGACCTGTACTCGCGCAAGATCGTTGGCTGGGCGATGGCA CCGAGCATGCCTGCCGAGCTGGTGTGCTGCGCCTTGCAGATGGCCATCGTCCTGCGCCAGCCCAAGCCGGGACTGATCAT GCATACCGACCGCGGTAGCCAATACGCCAGTCAGGCCCACCGTGATCTGCTGGCCAAGCACAAGCTGGTGGCCAGCATGA GCCGCAAGGGCAACTGCTGGGACAACGCGGTCATGGAGCGGTTCTTCCTGAACCTGAAAATGGAGCGCGTCTGGCAGCGC CGCTACGCCAACCCTGCCGAAGCCAGCGCCGACATCACCCACTACATCGTCGCCTTCTACAACACCCGACGGCTGCACTC CACCCTCGGCTATCGATCACCGGCCGACTACGAGAACGCCGCCGCCTGA Protein sequence : MIQQMIQQWQEKARTARLCRLLGVSRSGVYAARRRRPAPRADVLAAAVQTAFQASGGNYGSRRLSASLKAQGLPAGRHRV RRLMKRHGLKARWKRKFTHTTDSRHDLPVAANVLDRRFKPSAADQAWVADITYIRTERGWLYLAAVLDLYSRKIVGWAMA PSMPAELVCCALQMAIVLRQPKPGLIMHTDRGSQYASQAHRDLLAKHKLVASMSRKGNCWDNAVMERFFLNLKMERVWQR RYANPAEASADITHYIVAFYNTRRLHSTLGYRSPADYENAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 3e-47 | 49 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-47 | 49 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-47 | 49 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 7e-44 | 45 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 6e-44 | 45 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 5e-44 | 45 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 2e-43 | 45 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 2e-43 | 45 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 7e-44 | 45 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 7e-44 | 45 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 7e-44 | 45 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 2e-42 | 45 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 1e-42 | 45 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 5e-43 | 44 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 1e-40 | 44 |
| RS04 | AAP82949.1 | putative transposase | Not tested | PAPI-2 | Protein | 2e-30 | 43 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 1e-40 | 42 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 1e-40 | 42 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 1e-39 | 42 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 9e-32 | 41 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 9e-32 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XOO_1999 | YP_451028.1 | transposase | VFG1706 | Protein | 3e-44 | 45 |
| XOO_1999 | YP_451028.1 | transposase | VFG1631 | Protein | 9e-40 | 42 |
| XOO_1999 | YP_451028.1 | transposase | VFG1484 | Protein | 5e-32 | 41 |
