Gene Information

Name : XOO_1936 (XOO_1936)
Accession : YP_450965.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : ISXoo15 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 2138889 - 2139431 bp
Length : 543 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker; truncated

DNA sequence :
GTGCCGGAGGAGTTGCGGATTGTGCATCGCCCCGAAGAAGTGCAGACGCGCTTGGTCCCAGGTCATTGGGAAGGCGACTT
GATCAAGGGCGCATTCAATCGTTCTTGCGTGGGCACGTTGGTGGAACGCAAGACGCGCTTTGTCGTGCTGTGCCGCATGG
ATGGCTGCACGGCCGCAGATGCGCTGGAAGGGTTTACCCGGCAAATGAAGAAACTGCCGGCCTCAATGCGGACAAGTCTG
ACCTACGATCGCGGTACCGAGCTCACGTGCTACGCCGAGCTGATGCAAGGATTGAACATCGACGTGTGGTTCGCTGATCC
ACATGCGCCGTGGCAGCGGGGAAGTAACGAGAACACCAACGGCTTGCTGCGCCAATTCCTGCCCAAGGGCGCCGACCTGT
CCACTGTCAGCCAAGAGTATCTCAATCACATCGCACTGCTGATGAATACCCGCCCTCGTCAGACGCTCGGATGGAAGACA
CCAAGCGAGGCAATGGAGGAAGAAATCGCAGCACTCAAATCACGTGTTGCACTTGAATCTTGA

Protein sequence :
MPEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAADALEGFTRQMKKLPASMRTSL
TYDRGTELTCYAELMQGLNIDVWFADPHAPWQRGSNENTNGLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKT
PSEAMEEEIAALKSRVALES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXB5 ABD94692.1 putative IS30 family transposase Not tested ExoU island B Protein 1e-31 46
CDCE8392_1981 YP_005134512.1 transposase-like protein Not tested Not named Protein 2e-29 44