Gene Information

Name : XOO_1895 (XOO_1895)
Accession : YP_450924.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : ISXoo3 transposase orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2092666 - 2093151 bp
Length : 486 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker; truncated

DNA sequence :
ATGGACGTCGTGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACGCAACCCACGAAGC
GGTCGCCATCGACGTGGAGCGTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATCGGTTGGCACACAGTCGTGGCC
TGCCGAAGATGATCCGCACGGACAATGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCATGCCAATCGTGTG
CAGCTACGCCAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAACGGCCGGCTACGCGACGAATG
CCTCAACGAACACTGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATACAACGAACACC
GCCCCAAAAAAACAATCGGCGGAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCAATAGCGATATCATCAACCCCGGA
CTCTAA

Protein sequence :
MDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRTDNGKEFCGKAMVAWAHANRV
QLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIGGMTPAAYAQQLANSDIINPG
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46578.1 IS1222-like transposase Not tested HPI Protein 4e-34 54
RS13 AAP82958.1 putative transposase Not tested PAPI-2 Protein 2e-31 54