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Name : XOO_1610 (XOO_1610) Accession : YP_450639.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : phage-related capsid packaging protein Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 1753453 - 1754475 bp Length : 1023 bp Strand : + Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGTTGACCGACCAGCTGCCCGCCACCGCGCCTGCAGCGCCAGCCGTGCCCGCACGCACCGAGGCGTTCACCTTTGGCGA CCCGACGCCGGTGCTCGATGGGCGCGGCGTGCTGGACTATCTGGAGTGCTGGCAGAACGGGCGCTGGTACGAGCCGCCGG TGGCGCTGGATGGCCTGTCCAAGACCACGCGCAGCAATCCCTTCCTGCAGTCCGGGCTGATCTTCAAGCGCAACATGCTG GCGCGCACCTTCAAGCCGCATCGGCTCCTGACGCGTGAGGCCTTCGAGCAGCTGTCGCTGGATTGGATCACCCTGGGCAA TGGCTACCTCGAGCGCCGCCGCAACCGCATGGGCGGTGCGCTGTCGCTGGCTGCGCCGTTGTCCAAGTACATGCGGCGCG GTATCACCGAGGGCGAGTACTTCCAGGTGCGCACCTGGCACGACGAGCACGTGTTCGAGCCGGGCAGCGTGTTCCAGCTG CGCGAAGCCGATGTCGATCAAGAACTCTACGGCCTGCCTGAGTGGATGCCGGCGATGCAGTCCGCGCTGCTCAACGAATC GGCCACGCTGTTTCGCCGCAAGTACTACAACAACGGCTCGCATGCCGGTTTCATCCTGTACCTGACCGACCCGCAGCAGA GCCAGGAAGACGTCGATGCGCTGCGCACCGCCATGAAGGGCGCCAAGGGGCCGGGCAACTTCCGCAACCTGTTCCTGTAT TCGCCCGGCGGCAACAAGGATGGGCTGAAGCTCATCCCGGTCAGCGAAGTGGCGGCCAAGGACGAGTTCAGCGGCATCAA AGGCATCACCCGCGACGACATGCTCGCCGCGCTGCGCATCCCACCGCAACTCATGGGCATCGTGCCGCAGAACGCAGGCG GCTTCGGATCGATCCGTGAGGCCGCTGCCGTGTGGGCCGCCAACGAGCTGGAGCCGCTGCAGGCGCGCATGCTGAAGATC AACGACTGGGTGGGCGATGAGGTGATCTCGTTCACCCAGTACGCGCCGCCAGCGACCGCGTAA Protein sequence : MLTDQLPATAPAAPAVPARTEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLSKTTRSNPFLQSGLIFKRNML ARTFKPHRLLTREAFEQLSLDWITLGNGYLERRRNRMGGALSLAAPLSKYMRRGITEGEYFQVRTWHDEHVFEPGSVFQL READVDQELYGLPEWMPAMQSALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRTAMKGAKGPGNFRNLFLY SPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIREAAAVWAANELEPLQARMLKI NDWVGDEVISFTQYAPPATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 2e-115 | 71 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 3e-93 | 57 |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 3e-93 | 57 |
