Gene Information

Name : XOO_1610 (XOO_1610)
Accession : YP_450639.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : phage-related capsid packaging protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 1753453 - 1754475 bp
Length : 1023 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGTTGACCGACCAGCTGCCCGCCACCGCGCCTGCAGCGCCAGCCGTGCCCGCACGCACCGAGGCGTTCACCTTTGGCGA
CCCGACGCCGGTGCTCGATGGGCGCGGCGTGCTGGACTATCTGGAGTGCTGGCAGAACGGGCGCTGGTACGAGCCGCCGG
TGGCGCTGGATGGCCTGTCCAAGACCACGCGCAGCAATCCCTTCCTGCAGTCCGGGCTGATCTTCAAGCGCAACATGCTG
GCGCGCACCTTCAAGCCGCATCGGCTCCTGACGCGTGAGGCCTTCGAGCAGCTGTCGCTGGATTGGATCACCCTGGGCAA
TGGCTACCTCGAGCGCCGCCGCAACCGCATGGGCGGTGCGCTGTCGCTGGCTGCGCCGTTGTCCAAGTACATGCGGCGCG
GTATCACCGAGGGCGAGTACTTCCAGGTGCGCACCTGGCACGACGAGCACGTGTTCGAGCCGGGCAGCGTGTTCCAGCTG
CGCGAAGCCGATGTCGATCAAGAACTCTACGGCCTGCCTGAGTGGATGCCGGCGATGCAGTCCGCGCTGCTCAACGAATC
GGCCACGCTGTTTCGCCGCAAGTACTACAACAACGGCTCGCATGCCGGTTTCATCCTGTACCTGACCGACCCGCAGCAGA
GCCAGGAAGACGTCGATGCGCTGCGCACCGCCATGAAGGGCGCCAAGGGGCCGGGCAACTTCCGCAACCTGTTCCTGTAT
TCGCCCGGCGGCAACAAGGATGGGCTGAAGCTCATCCCGGTCAGCGAAGTGGCGGCCAAGGACGAGTTCAGCGGCATCAA
AGGCATCACCCGCGACGACATGCTCGCCGCGCTGCGCATCCCACCGCAACTCATGGGCATCGTGCCGCAGAACGCAGGCG
GCTTCGGATCGATCCGTGAGGCCGCTGCCGTGTGGGCCGCCAACGAGCTGGAGCCGCTGCAGGCGCGCATGCTGAAGATC
AACGACTGGGTGGGCGATGAGGTGATCTCGTTCACCCAGTACGCGCCGCCAGCGACCGCGTAA

Protein sequence :
MLTDQLPATAPAAPAVPARTEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLSKTTRSNPFLQSGLIFKRNML
ARTFKPHRLLTREAFEQLSLDWITLGNGYLERRRNRMGGALSLAAPLSKYMRRGITEGEYFQVRTWHDEHVFEPGSVFQL
READVDQELYGLPEWMPAMQSALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRTAMKGAKGPGNFRNLFLY
SPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIREAAAVWAANELEPLQARMLKI
NDWVGDEVISFTQYAPPATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 2e-115 71
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 3e-93 57
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 3e-93 57