Gene Information

Name : XOO_1609 (XOO_1609)
Accession : YP_450638.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : phage-related terminase
Function : -
COG functional category : S : Function unknown
COG ID : COG5484
EC number : -
Position : 1751669 - 1753453 bp
Length : 1785 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
GTGGGCTGCACCCTGGTCGGCATGCAGAGCGTTTCCACCCAGCTCCCGATGGACACCCGCAGACAGGCCAAGTTCCTGTA
CTGGATGGGATGGCGCGTGACCGAAATTGCGCAGGCCATCGGCGAGAACGCGAAGACTGTACACAGCTGGAAGTCGCGTG
ACGAGTGGGATCGCGCAGACAACGTGGAGCGCATCGGTGGTGCACTGGAAGCGCGCCTTGTCGTGCTGATCATGAAACCG
GAAAAATCCGGTGGCGACTTCAAAGAAATTGATCTGCTGCATCGGCAGTTGGAGCGCCAGGCGCGCATCCAGCGCTACCA
AGGCGGCGGCAACGAAGCCGACTTGAATCCGGCCGTGGCGAATCGCAACGCCGCGCCGAAAAAGAAGCCCAAGCGCAACG
ACTTCACTGAGGAACAGGTCGAGCAGCTGACCACGGCATTCATCGACGGCTGCTTCGACTATCAGCGCGATTGGTACCGG
GCCAGCAACGAGCGTACCCGCGTCATCCTGAAGTCGCGTCAGATCGGTGCGACGTTTTACTTCGCCCGTGAGGCGCTGAT
CGATGCGCTCACCACCGGGCGCAATCAGATCTTCCTCAGCGCATCCAAGGCACAGGCGCATCTGTTCCGTGGCTACATGC
AGCAGTTCGTGCGCGAGACGATCGACGAGACGCTCTCCGGCGGCGACAGCATCGTGTTTCCCAACGGCGCCGAGCTGTTC
TTCCTGGGAACCAATGCGCGCACCGCGCAGGGTTACCACGGCAATTTCTACTTCGACGAGTTCTTCTGGACCTATGGGTT
CAACGAATTGAACAAGGTCGCCAGCGGCATGGCGATGCACAAGAAGTGGCGCAAGACCTACTTCAGCACGCCATCCAGCA
TGGCCCATGAGGCCTACACCTTCTGGACCGGCGAGCGCCGCAACAAGGGCAAACCGGCCGCACAGCGCATCCAGATCGAT
GTCTCGCACGATGCATTGGCCGGCGGGCGCCGCTGCCAGGACCGCGCCTGGCGGCAGATCGTCAACATCCTCGACGCGCA
GCGCCGTGGCTGCGACCTGTTCGACATCGACGAGCTGCGCGAGGAATACAGCCCGGACGCGTTCGCCAACCTGTTGATGT
GCGACTTCGTCGACGACGGCGCCAGCATCTTCCCGTTGGCGATGCTGCAGCCGTGCATGGTCGACAGCTGGGTCGAGTGG
GGCCAGGACTACAAACCGTTCGCCGTGCGCCCCTACGGCGATCGCGCCGTGTGGATCGGCTACGACCCCGCCGAGACGGG
AGATACCGCCGGACTGGTTGTGTTGGCACCACCGCAGCAGCCCGGCGGCAAGTTCCGGCTGTTGGAGCGGATCCAGTTCC
GGGGCATGGACTTTGCCAAGCAGGCAGCCGAGATCGAGCGCATCACGCGCCGCTACTGGGTGACCTACATCGGCATCGAC
ACCACCGGCATGGGCAGCGGTGTGGCGCAGTTGGTGAAGCAGTTCTTCCCGAATCTGGTCACCTTCAGCTACTCGCCTGA
AGTGAAGACACGCCTGGTGCTCAAGGCGTTCGACGTGATCCACAACGGGCGGCTGGAGTTCGACGCCGGCTGGACCGACG
TGGCGCAGTCGTTGATGGCCATCCGCAAGACCATGACGGCCAGTGGCCGGCAGTCCACCTTCAGCGCTGGCCGCTCGGAA
GAGACCGGCCACGCGGACCTGGCGTGGGCACTGTTCCACGCGCTGCAGAACGAACCGCTGGAAGGGCGCACCGCGCGCAA
CTCCGGCTTCATGGAGATCTCTTGA

Protein sequence :
MGCTLVGMQSVSTQLPMDTRRQAKFLYWMGWRVTEIAQAIGENAKTVHSWKSRDEWDRADNVERIGGALEARLVVLIMKP
EKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVANRNAAPKKKPKRNDFTEEQVEQLTTAFIDGCFDYQRDWYR
ASNERTRVILKSRQIGATFYFAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELF
FLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYTFWTGERRNKGKPAAQRIQID
VSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIDELREEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEW
GQDYKPFAVRPYGDRAVWIGYDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGID
TTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNGRLEFDAGWTDVAQSLMAIRKTMTASGRQSTFSAGRSE
ETGHADLAWALFHALQNEPLEGRTARNSGFMEIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13464.1 predicted ATPase terminase subunit Not tested PAGI-6 Protein 0.0 77
t4322 NP_807916.1 terminase subunit Not tested SPI-7 Protein 2e-158 59
STY4627 NP_458709.1 probable terminase subunit Not tested SPI-7 Protein 1e-158 59