Gene Information

Name : XOO_1605 (XOO_1605)
Accession : YP_450634.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : phage-related capsid completion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1748352 - 1748819 bp
Length : 468 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGAGCGGATTCACGGCCACCGGCACCACCAGCGCCACGCCTGATGCGATCGCCAATGCGCCGTTCTGGCCGGCGATTGC
ACCGGCCGATGTGCGGGCCAGCATGCGCCTGGATGGCACCGTCACCGATGCGCGTCTGCGCCAGGCGATCGTTGCCGCCA
TGTTGGCGGTCAACGACGCGCTGCAGGCCTGGGCGGATACGCAGCAGGCGGTCGGCTACGCGGTGTTGAGCGATGTCCCC
AGCACGACCGTCGACGGCGTCTCGCGCCGCGTGCAGCTGTACCTGCGTGCGGTGGCGTGTGCCACCGCCGTCGAGGTGAC
AGAGCGTTACCGCAGCTTCGATGCCACCAACAGCGCCAACCAGCGCGCCGATGACCTGACGCCGAGCATCACCGAATTGC
GCCGCGACCAGCGCTGGGCGGTGCGTGATCTGCAGAACCTGCCGCGCAGCACGGTGGAGCTCATCTGA

Protein sequence :
MSGFTATGTTSATPDAIANAPFWPAIAPADVRASMRLDGTVTDARLRQAIVAAMLAVNDALQAWADTQQAVGYAVLSDVP
STTVDGVSRRVQLYLRAVACATAVEVTERYRSFDATNSANQRADDLTPSITELRRDQRWAVRDLQNLPRSTVELI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13468.1 predicted capsid completion protein Not tested PAGI-6 Protein 2e-27 51
t4317 NP_807912.1 capsid completion protein Not tested SPI-7 Protein 7e-22 41
STY4623 NP_458705.1 putative capsid completion protein Not tested SPI-7 Protein 7e-22 41