Gene Information

Name : XOO_1596 (XOO_1596)
Accession : YP_450625.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : phage-related baseplate assembly protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 1742856 - 1743746 bp
Length : 891 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGGCTTCATTTACTGCGGTAGATCTATCCAGACTTAAAGCCCCAGATCTGATCGATGCGCTGGACTTCGAGACAATCTT
TGCAGAAGCGCTTGCTCAATTCCGCAAGCTACTGCCGGAATTCTCTGCGCTCACCGAAGCCGATCCGGTCTACAAGATCC
TGCAGCTGTTCGCGGCTCGCGAGCTCCTGCTGCGCCAGCGCGCCAACGACAAGGCGCAGCAGACCATGCTGGCCTTCGCC
ACTGGCGCCAATCTCGACCACCTGGGTGCACTGTTCGGTGTAGCCCGCCTTGTGCTCGATCCGGGCCAACGGGATATCGG
CCTTGCACCGACCTACGAGTCGGATGTCGACTTCCGCCGCCGCATCCAGCTTGCGCCGGAGGGATTCAGCGTAGCGGGCC
CCGAGGGGGCGTACATCTTCCACGCGCTGAGTGCATCCGCTGACGTCATGGATGCCAGCGCGACCAGCCCCGCGCCCGGG
CAAGTCCTGGTCACCGTGCAATCGCGCACGGGCGACGGAACCGCGCCGCAGGAGCTGCTGGATGAAGTCGCGGCCGTCCT
CGCAGACGACGGCGTACGCCCGCTGACCGATGAGGTCGCAGTGCAGAGCGCCGAGATCATCCCGTATGCCATTCGTGGGC
GCCTCTACACCTATGCCGGCCCCGACTCGGCGGTCGTCATCCGTGAAGCGCTGCGCAGCCTGCAGGCCTACCTTGCCGAA
GCGCATCGGATCGGCCGCGACGTCCCCGAATCCGCGATCAAGGCCAAGCTGTTCGCCGATGGCGTGCAGCGCATCGAGCT
AGATGAGCCCGCCGCCGACATCCGGATCAGCCGGACCCAGGCCGCGTACTGCACGGCAATTGACATCGTGCACGCGGGCA
TCGATGAGTAG

Protein sequence :
MASFTAVDLSRLKAPDLIDALDFETIFAEALAQFRKLLPEFSALTEADPVYKILQLFAARELLLRQRANDKAQQTMLAFA
TGANLDHLGALFGVARLVLDPGQRDIGLAPTYESDVDFRRRIQLAPEGFSVAGPEGAYIFHALSASADVMDASATSPAPG
QVLVTVQSRTGDGTAPQELLDEVAAVLADDGVRPLTDEVAVQSAEIIPYAIRGRLYTYAGPDSAVVIREALRSLQAYLAE
AHRIGRDVPESAIKAKLFADGVQRIELDEPAADIRISRTQAAYCTAIDIVHAGIDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 9e-53 48
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 9e-53 48
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 8e-39 42