Gene Information

Name : XOO_1590 (XOO_1590)
Accession : YP_450619.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : phage-related tail protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3497
EC number : -
Position : 1738059 - 1739225 bp
Length : 1167 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGTCCACTGCCTACCACCACGGCGTCCGCGTCATCGAAGTCAGCGCGGGCACGCGCACCATCCGTACCGTCTCCACCGC
TGTCGTCGGCCTGATCGCCACAGCCTCCGACGCGGACGAGAAAGTCTTTCCGCTCAACAAGGCGGTGCTGATCACCGACG
TGCTCGGTGCGATCGCCAGCGCCGGCATCCAGGGCACATTGCGCGCGACGCTGCAGGGCATCGCCGACCAAACCAACCCG
GTGACCATCGTCGTGCGCGTGGCCGAGGACGCAGACGCGGGCAACATCCCAACCAACGTCATCGGAGAGGCCAGGTCCAA
CAGCTATACAGGCCTGTATGCCTTGCTCGCCGCACAGGCACAGTTGGGCGTGCGCCCGCGCATCCTGGGCGCACCAGGTC
TGGACACGCTCCCGGTGGCCAAGCTATTGGCGACCATTGCCAAGAAGCTGCGCGCAATGGCGTATGTGCGACCGGTTGCC
GAGACCGTCGCCGAGGCTGTCACGTATCGCGGCCAGTTCAGCGATCGTGAGCTGATGCTGATCTGGCCGGACTTCCTGGC
CTTCGATACCGCCACGAGTACCACGACCGCCGCGTATGCCACCGCACGTGCGCTCGGTCTGCGCGCCAAGATCGACACCG
AACAGGGCTGGCACAAGAGTCTGTCAAACGTGCCGGTGGCCGGCGTCACCGGCATCTCCAAGGATGTGCACTGGGATCTG
CAGGATCCTGCCACCGATGCCGGCGTGCTCAACGAAGGCGACATCACCACGCTGGTGACCTTCAATGGGCAACGCTTCTG
GGGATCGCGCACGTGCGCCGAAGACCGCATGTTCGCGTTCGAGACGGCCACGCGCACCGCGCAGATCCTGGCCGACACCA
TCGCCGAAGGCGTGGCGTTCTACGTCGATAAACCGATGCATCCCTCGATGGTCAAAGACCTGATCGAAACGATCAACGCC
AAGTTCCGCGACCTCAAATCGTCCGGTTATCTGATCGATGCCAACGCCTGGTACGACGGCACCCTCAACAGCGCCACCAC
GCTGGCCGATGGCGCGCTGCGCATCGACTACGACTACACACCGGTGCCGCCGCTGGAGAACCTGCAGCTGTATCAGAAGA
TCACCACCAGCTACCTGGCCGACTTTGCCGAACGCGTCAACGCGTAA

Protein sequence :
MSTAYHHGVRVIEVSAGTRTIRTVSTAVVGLIATASDADEKVFPLNKAVLITDVLGAIASAGIQGTLRATLQGIADQTNP
VTIVVRVAEDADAGNIPTNVIGEARSNSYTGLYALLAAQAQLGVRPRILGAPGLDTLPVAKLLATIAKKLRAMAYVRPVA
ETVAEAVTYRGQFSDRELMLIWPDFLAFDTATSTTTAAYATARALGLRAKIDTEQGWHKSLSNVPVAGVTGISKDVHWDL
QDPATDAGVLNEGDITTLVTFNGQRFWGSRTCAEDRMFAFETATRTAQILADTIAEGVAFYVDKPMHPSMVKDLIETINA
KFRDLKSSGYLIDANAWYDGTLNSATTLADGALRIDYDYTPVPPLENLQLYQKITTSYLADFAERVNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13484.1 putative tail sheath protein Not tested PAGI-6 Protein 4e-102 61
STY4607 NP_458690.1 probable major tail sheath protein Not tested SPI-7 Protein 6e-95 58
t4301 NP_807898.1 major tail sheath protein Not tested SPI-7 Protein 6e-95 58