|
Name : XOO_1570 (XOO_1570) Accession : YP_450599.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : phage-related integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1723804 - 1724988 bp Length : 1185 bp Strand : - Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGGGACGCGGTAGAAAAAGGAAGTTCAACCCAGCTATTCCGGCCCATATCGATCAGGCCGCCCTGCCGCAAGGCGTGTA TTGGGAGGATGGCCGCTGGTACATCATCGAAGCACATCCTGAGGGAGGCCGTCCTAAGAAAAGGACGGTCGCACACAGAC ATTCGCGCCTTTCGGAACTCCACGCGATTGTGGAATGCGCGCGGGGCGAGATCGAGAGAGGCACTCTGGCCTTCTTGGAC GAGCGCTTCCACCGATCCACCGAGTTCAAGGCTCTCGCGCCTGGCACCCAGAAGGACTACAGGCAAAGTGGTCAAGCAGC CTGCGCCTACGTGCTGAAAGACGGCAGCCAGCTTGGGCGGATGCAAGTAACGCGTATCAATGTCCCGACCATGCAGCGCT TGGTGGAGACTCTCGCAGCAGGGCGAGAGGCCACAGCTATGCAACCAGCAATCGAGCCTCGCCCGAGCAAGGCCAACCAC GTGCTTCGATACCTTCGCCGCCTCTTTGGGTGGGGAATACGATTTGGGCTGTGCGAACACAACCCGGCCAAGGGCGTACG CCAGGCGAAGGAGCTGGCCGCTCACACGATGCCGGAGCAGGACGCTTTCACTGCAATATTGCGGTTTGCGCAGCAGCGAG CCACCTTTGACGCGCACACCAAAGGCAGCGTCTCGCCATACCTGCATGCGGTGATGGTCCTGGCCTACAACCTGAGGCTG CGCGGGGCTGAAGTGACCGATCTCACTGACGCGCATGCCGGCGAGCAGGGCATCTTGGCGAGGCGGCGAAAAGGCTCGCG CGACAACGTCACGCTCTGGAACGAAGAACTGCGCGGCGCGTGGGCATGGTTGATTGAGTACCGCAGGCGCACGATGGCCG CGCACGAGCGGCCCGTTCCTCTAAAGCCGGAGCAGCGCCGGCTGGTCGTCAGCCAATCGGGAACGCCGTTAACGAAGTCG GCACTTGACAGCGCGTGGCAACGCATGATGACCCTCGCTATCCGGGAGGGCGTGATCGAAGAGGCTCAGAGGTTCAGCCT CCACGGATTGAAGCACCGTGGCATCACAGATACGGAGGGCAACCTGGCTGACAAGCAAGAAGCCGCAGGCCACAAAACCC AGGAAATGACGCGGCGTTATTCGCACGATGTGCCAGTCGTAAAGCCGCCTCGCCGGATTCCGTAG Protein sequence : MGRGRKRKFNPAIPAHIDQAALPQGVYWEDGRWYIIEAHPEGGRPKKRTVAHRHSRLSELHAIVECARGEIERGTLAFLD ERFHRSTEFKALAPGTQKDYRQSGQAACAYVLKDGSQLGRMQVTRINVPTMQRLVETLAAGREATAMQPAIEPRPSKANH VLRYLRRLFGWGIRFGLCEHNPAKGVRQAKELAAHTMPEQDAFTAILRFAQQRATFDAHTKGSVSPYLHAVMVLAYNLRL RGAEVTDLTDAHAGEQGILARRRKGSRDNVTLWNEELRGAWAWLIEYRRRTMAAHERPVPLKPEQRRLVVSQSGTPLTKS ALDSAWQRMMTLAIREGVIEEAQRFSLHGLKHRGITDTEGNLADKQEAAGHKTQEMTRRYSHDVPVVKPPRRIP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13504.1 | site-specific recombinase | Not tested | PAGI-6 | Protein | 3e-62 | 42 |
