Gene Information

Name : XOO_1528 (XOO_1528)
Accession : YP_450557.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : ISXoo3 transposase orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1683489 - 1684349 bp
Length : 861 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGCGCTGCAAAAACAATGGTGAGCGCACCGGCGCGTCGTACGCTGGTGCGCGAGTGGACGCAGGTGGCGCCAGCGAGCG
CTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGTGCGCTGCGCTATTGCCCGCGCGAGGACCGCAACGTTGAGCTGCGCG
AGCACAGTGTTGCGTTGGCGCATCGCCATCGCCGCTACGGCGTAGGGATGATCTCTCTCAAGCTGCGGCAGGAAGGTCGT
CTCGTGAGCTATAAGCGGGTAGAGCGGCTGTATTGCGAGCAGCAGCTGCAGGTCCGCCGCCGCACGCGTAAAAAGGTGCC
GCTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACCAAGGCCAACCAGGTGTGGTCGATGGACGTCGTGTTCGACCGCACCG
CCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACGCAACCCACGAAGCGGTCGCCATCGACGTGGAGCGTGCG
ATCTCGGGACACGGCGTTGTGCGCGTGCTGGATCGGTTGGCACACAGTCGTGGCCTGCCGAAGATGATCCGCACGGACAA
TGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCATGCCAATCGTGTGCAGCTACGCCAGATCCAGCCTGGCA
AGCCGAACCAGAATGCCTACGTCGAATCCTTCAACGGCCGGCTACGCGACGAATGCCTCAACGAACACTGGTTCCCAACG
CTGCTGCATGCGCACACCGAGATCGAACGCTGGCGCCGCGAATACAACGAACACCGCCCCAAAAAAACAATCGGCGGAAT
GACGCCGGCGGCCTATGCCCAGCAGTTGGCCCATAGCGATATCATCAACCCCGGACTCTAA

Protein sequence :
MRCKNNGERTGASYAGARVDAGGASERCALAAIGMSASALRYCPREDRNVELREHSVALAHRHRRYGVGMISLKLRQEGR
LVSYKRVERLYCEQQLQVRRRTRKKVPLGERAPLLRPTKANQVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERA
ISGHGVVRVLDRLAHSRGLPKMIRTDNGKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPT
LLHAHTEIERWRREYNEHRPKKTIGGMTPAAYAQQLAHSDIINPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-48 53
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-57 51