Gene Information

Name : XOO_1251 (XOO_1251)
Accession : YP_450280.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : ISXoo3 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1364497 - 1365546 bp
Length : 1050 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence : 
ATGCTGATCTGGCCATCACAGACCTCTGCCCGGCGGCATGGTTTCAGTGAGGCTTCCTACTGCCTGTGGCGCAGCAAGTT
CGGCGGCATGAGCATGCCCGATGCCAAGCGGCTCAAGGATCTGGAGGCCGAGAACACGCGGCTGAAGAAGTTGCTGGCCG
AGCAGGTGTTCCAGAACGACCTGATCAAGGATGCGCTGCAAAAAATGGTGAGCGCACCGGCGCGTCGTGCGCTGGTGCGC
GAGTGGATCGCAGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGTGCGCTGCGCTATCGCCC
GCGCGAGGACCGCAACGTTGAGTTGCGCGAGCGCATCCTTGCGTTGGCGCATCGCCATCGCCGCTATGGCGTGGGGATGA
TCTCTCTCAAGCTGCGGCAGGAAGGGCGTCTCGTGAACTATAAGCGGGTGGAGCGGCTGTATTGCGAGCAGCAGCTGCAG
GTCCGCCGCCGCAAGCGTAAAAAGGTGCCGCTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACCAAGGCCAACCCGGTGTG
GTCGATGGACGTCGTGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACGCAACCCACG
AAGCGGTCGCCATCGACGTGGAGCGTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATCGGTTGGCACACAGTCGT
GGCCTGCCGAAGATGATCCGCACGGACAATGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCATGCCAATCG
TGTGCAGCTACGCCAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTATGTCGAATCCTTCAACGGCCGGCTACGCGACG
AATGCCTCAACAAACATGGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATACAACGAA
CACCGCCCCAAAAAAACAATCGGCGGAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCAATAGCGATATCATCAACCC
CGGACTCTAA

Protein sequence : 
MLIWPSQTSARRHGFSEASYCLWRSKFGGMSMPDAKRLKDLEAENTRLKKLLAEQVFQNDLIKDALQKMVSAPARRALVR
EWIAGGASERCALAAIGMSASALRYRPREDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERLYCEQQLQ
VRRRKRKKVPLGERAPLLRPTKANPVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSR
GLPKMIRTDNGKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNKHGFPTLLHARTEIERWRREYNE
HRPKKTIGGMTPAAYAQQLANSDIINPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-51 52