|
Name : XOO_1231 (XOO_1231) Accession : YP_450260.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : ISXoo3 transposase orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1342014 - 1342559 bp Length : 546 bp Strand : - Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker; truncated DNA sequence : GTGCCGGTAGGCGAGCGTGCACCGTTGCTGTGGCCCACCAAGGCCAACCCGGTGTGGTCCATGGACGTCGTGTTCGACCG CACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACGCAACCCACGAAGCGGTCGCCATCGACGTGGAGC GTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATCGGTTGGCACACAGTCGTGGCCTGCCGAAGATGATCCGCACG GACAATTGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCATGCCAATCGTGTGCAGCTACGCCAGATCCAGCC TGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAACGGCCGGCTACGCGACGAATGCCTCAACGAACACTGGTTCC CAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATACAACGAACACCGCCCCAAAAAAACAATCGGC GGAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCAATAGCGATATCATCAACCCCGGACTCTAA Protein sequence : MPVGERAPLLWPTKANPVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRT DNCKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIG GMTPAAYAQQLANSDIINPGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 1e-42 | 58 |
| unnamed | CAB46578.1 | IS1222-like transposase | Not tested | HPI | Protein | 1e-32 | 53 |
| RS13 | AAP82958.1 | putative transposase | Not tested | PAPI-2 | Protein | 4e-31 | 52 |
