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Name : XOO_1229 (XOO_1229) Accession : YP_450258.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1338118 - 1340703 bp Length : 2586 bp Strand : + Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGCGGATGGACAAGCTCACCTCGCGGTTCCAGCAGGCGCTGGCCGACGCGCAGTCGCTGGCTGTGGGCCGCGACCACAA CATCATCGAGCCGGTGCACGTGCTGGCCGCGCTGCTCGACCAAAGTGGCGGCAGCACGCGTCCGCTGCTGTCGCAGGCCG GCGTCAACGTGCCGTTGCTACGCGAACGGCTGGGCGAGGCGCTGGACACGTTGCCCAAGGTGTCCGGGCAGGAAGGCAAT CTGTCGATCGGCAACGACCTCAACCGCCTGCTCAACCAGACCGACAAGCTCGCCCAGCAACATGGCGATGCGTTCATCGC CAGCGAATGGTTCGTGCTGGCCGCCGCCGACGATGCCAGCCCGCTGGGCGTGGCGTTGCGCGCGGCCGGTGGCGACAAGA AGAAGATCGAGGCGGCCATCGACAAGCTGCGTGGCGGCGAAACAGTGCAATCGGAAAATGCCGAAGAGCAGCGCCAGGCG CTGGAAAAATACACCATCGACCTGACCGCGCGTGCCGAAAGCGGCAAGCTCGATCCGGTGATCGGCCGCGATGAAGAAAT CCGCCGCACCATCCAGGTCTTGCAGCGCCGTACCAAGAACAACCCGGTGCTGATCGGCGAACCCGGCGTGGGCAAGACCG CCATTGTCGAGGGCCTGGCCCAGCGCATCATCAACGGCGAAGTGCCTGAAGGCCTGCGCGGCAAGCGCGTGCTGTCGCTG GACATGGGCGCGCTGATTGCCGGTGCCAAATTCCGCGGCGAATTCGAAGAACGCCTGAAGGCGGTGCTCAGCGACCTTTC GAAGACCGAAGGCCAGATCATCCTGTTCATCGACGAGCTGCATACCATGGTCGGTGCCGGCAAGGCCGATGGTGCGATGG ATGCCGGCAACATGCTCAAGCCGGCGCTGGCACGCGGCGAGCTGCATTGCATTGGCGCCACCACGCTGGACGAATACCGC AAATACATCGAAAAAGACGCGGCATTGGAGCGCCGCTTCCAGAAAGTGTTCGTCGGCGAGCCGACCGTGGAAGACACCAT TGCGATCCTGCGCGGCCTGAAGGAGCGCTACGCGGTGCATCACGGCGTGGAGATTACCGACCCGGCGATCGTCGCCGCTG CCACGCTCTCAAATCGCTACATCACCGACCGCCAGCTGCCGGACAAGGCCATCGACCTGATGGACGAAGCCGCCTCCCGC ATTCGCATGGAGATCGACTCCAAGCCGGAGGAGCTTGATCGCCTGGAGCGCCGCCTGATCCAGCTCAAGATCCAGCGCGA GATGTTGAAGAAGGAAAAGGATGACGCCTCGCGCCAGCGCCTGGCGGACCTGGAAAGCGATATCGACAAGCTCGAACGCG AGTTCTATGACCTAAACGAACTGTGGAAGTCCGAGAAGGCCGCGCTGCAGGGCACCACCAAGATCAAGGAGCAGATCGAG CACGCCAAGCTGGAACTGGAGGCCGCACAGCGCCGCCAGGACTACGCCAAGATGAGCGAGATCCAGTACGGCGTGTTGCC ACAACTGGAAAAGCAGATGCTGATCGCCAACGAAGTCGAGCACCACGACTTCAAGCTGGTGCAGGACCGCGTGACCGCCG AGGAAATTGCCGAAGTTGTATCGCGCTGGACCGGCATTCCGGTCAACAAGATGCTGGAAGGCGAGCGTGACAAGTTGCTG CGCATGGAAGACGAGCTGCATCACCGCGTGGTCGGCCAGAACGAGGCGATCAAGGTGGTGTCCGATGCGGTACGGCGTTC GCGCGCCGGCTTGTCCGATCCCAATCGCCCGAGCGGTTCGTTTCTGTTCCTGGGCCCGACCGGCGTGGGCAAGACCGAGT TGTGCAAGGCGCTGGCCGATTTCCTGTTCGACAGCACCGAAGCGATGATTCGCATCGACATGAGCGAGTTCATGGAGAAG CATGCGGTGGCGCGCCTGATCGGTGCGCCTCCGGGCTACGTGGGCTATGAAGAAGGCGGTTATCTCACCGAGGCGGTGCG TCGTCGTCCGTATGCGTTGATCCTGTTGGACGAAGTGGAAAAGGCGCATGCCGATGTCTTCAACATCCTGTTGCAAGTGC TCGACGACGGCCGTCTCACCGATGGGCAGGGTCGCACCGTGGACTTTCGCAACACCGTCATCGTGATGACCTCCAACCTG GGTTCGCATCAGATCCAGGAGCTGTCCGGCGATGGTAGCGCCGAGGCCTACACGCAGATGAAGGCAGCAGTCATGGGCGT GGTGCAGGCGCACTTCCGCCCGGAGTTCATCAACCGGCTCGACGACATCGTGGTGTTCCATCCGCTGGACAAGGCGCAGA TCAAATCGATTGCGCGCATCCAGTTGCAAGGTCTGGAAAAGCGCCTGGCCGAGCGCGGCCTCAGACTGGACCTGGACGAT GCGGCGCTGGAGCTGCTGGGCAATGTCGGCTTCGACCCGGTGTACGGCGCGCGCCCGCTCAAGCGCGCGATCCAGGCGCA GGTGGAGAACCCGCTGGCCCAGCAGATCCTGTCCGGCCAGTACGCCAGCGGCGAGACCGTGCGTGTGCGTGCCCAGGGTG GACGGCTGGAATTCGGCAAGGCTTGA Protein sequence : MRMDKLTSRFQQALADAQSLAVGRDHNIIEPVHVLAALLDQSGGSTRPLLSQAGVNVPLLRERLGEALDTLPKVSGQEGN LSIGNDLNRLLNQTDKLAQQHGDAFIASEWFVLAAADDASPLGVALRAAGGDKKKIEAAIDKLRGGETVQSENAEEQRQA LEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSL DMGALIAGAKFRGEFEERLKAVLSDLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYR KYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASR IRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIE HAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQMLIANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLL RMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEK HAVARLIGAPPGYVGYEEGGYLTEAVRRRPYALILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL GSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLRLDLDD AALELLGNVGFDPVYGARPLKRAIQAQVENPLAQQILSGQYASGETVRVRAQGGRLEFGKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-101 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XOO_1229 | YP_450258.1 | ATP-dependent Clp protease subunit | VFG0080 | Protein | 2e-126 | 44 |
| XOO_1229 | YP_450258.1 | ATP-dependent Clp protease subunit | VFG2076 | Protein | 1e-107 | 42 |
