Gene Information

Name : XOO_1208 (XOO_1208)
Accession : YP_450237.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1314267 - 1315187 bp
Length : 921 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker; truncated

DNA sequence :
GTGAAGCGCTTCATCGACGACCATCGCGACGTTCACGGGGTCGAGCCGATCTGCAAGGTGTTGCCGATCGCCCCGTCGAC
GTACTACGCGCACGCGGCCCGAAGGTCCGATCCTGAGTTGCGCTCGGCAAGGGCCAAGACGGACGAGGCGTTGATGCCTG
AAATCAGGCGTGTGTGGGACGAGAACTTCCAGGTCTATGGTGTGCGTCAGCTCTGGCGGCAGATGCGGCGGGAGCAGTTC
GCTGTTGCGCGCTGCACCGTGCAGCGTCTGATGAAGCGCCAGGGCCTGCGCGGTGTCATCCGCGGCAAGGCGGTGCGCAC
GACGGTGAGCGATGCGAAGGCGCCGTGCCCGCTCGATCACGTCAACAGGCAGTTCACTTCGGATCGGCCAAACGCGTTGT
GGGTCTCGGACTTCACCGATGTGTCGACGTGGCAAGGCTGGATCTGCGTCGCCTTCGTCATCGACGTATTCGCACGCCGG
ATCGTGGGCTGGAAGGCGTCGCCGTCGATGCGGACCGAGCTGGTGCTCGATGCGCTCGAGCAGGCGCTGCATGCGAGGAA
GCCGGTCGGATCGGAGCGTATGATCCACCACAGCGACCGGGGTGTGCAGTACGTCTCGATCCGCTACACCGAGCGGCTCG
CCGAGGCCGGCCTGGAGCCCTCGGTGGGCAGTGTGAGCGACTCGTACGACAACGCACTGGCCGAGACCATCAACGGCCTG
TGCAAGGCCGAGGTGATCCACCGCAAGTCGTCCTGGCGCACGCGCGAGGAGGTCGAGTGGGCCACCCTCACCTGGGTCGA
TTGGTTCAACAATCGCCGCGTGCTTGAGCCGATCGGCAACATCCCACCGGCCGAGGCCGAAGCAAACTATTACCTGATTA
GCCCCGACCTTCAGCTGCAGCACCTCCGCGCTTATCGCTAA

Protein sequence :
MKRFIDDHRDVHGVEPICKVLPIAPSTYYAHAARRSDPELRSARAKTDEALMPEIRRVWDENFQVYGVRQLWRQMRREQF
AVARCTVQRLMKRQGLRGVIRGKAVRTTVSDAKAPCPLDHVNRQFTSDRPNALWVSDFTDVSTWQGWICVAFVIDVFARR
IVGWKASPSMRTELVLDALEQALHARKPVGSERMIHHSDRGVQYVSIRYTERLAEAGLEPSVGSVSDSYDNALAETINGL
CKAEVIHRKSSWRTREEVEWATLTWVDWFNNRRVLEPIGNIPPAEAEANYYLISPDLQLQHLRAYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-66 67
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-78 64
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-78 64
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-75 64
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-75 64
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 3e-75 64
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-75 64
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 7e-76 63
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 5e-77 63
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 9e-77 63
Z1198 NP_286733.1 transposase Not tested TAI Protein 1e-75 63
Z1638 NP_287141.1 transposase Not tested TAI Protein 1e-75 63
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 6e-76 63
Z1221 NP_286756.1 transposase Not tested TAI Protein 3e-76 63
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-77 62
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 3e-76 62
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 4e-76 62
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-73 60
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-53 59
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-48 44
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 4e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO_1208 YP_450237.1 transposase VFG1602 Protein 1e-73 60