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Name : XOO_1188 (XOO_1188) Accession : YP_450217.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Virulence Product : polysialic acid capsule expression protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 1296193 - 1297194 bp Length : 1002 bp Strand : - Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGGCTGTCTCGCACCTGCCTCCCGCCACCGTCAGCGACGCCAGTCTGGTTGCCAGCGGTCAGCGCGTGCTGGAGATCGA GCGCGAGGCGCTGGCCAACGTGGGCGCGCGCATCGGCAGCGAGTTCGCCGCGGCCTGCCGGCTGGTGCTGGCCTCGCGCG GGCGGGTGGTCGCCACCGGCATGGGCAAGTCCGGCCATGTGGCGCGCAAGATCGCTGCCACCCTCGCCTCCACCGGCACT CCGGCGTTCTTCGTGCACCCCGGCGAAGCCGGCCATGGCGACCTGGGCATGATCACCGAGGCCGACATCGTGCTGGCGCT GTCGTATTCGGGGGAATCGGATGAAGTGCGCATGCTGCTGCCGGTGCTCAAGCGCCAGGGCAACCCGATCATCGCCATGA CCGGCCGCACCAGTTCCACCCTGGCCCAGGCCGCTGACGTGCACCTGGACGTCAGCGTCTCCGCCGAGGCCTGCCCGTTG CATCTGGCACCCACCTCCAGCACCACCGCCTCGCTGGCGATGGGCGATGCGCTGGCAGTCGCCTTGCTCGATGCGCGCGG CTTCACCGCCGACGACTTCGCGCGTTCGCATCCGGCCGGCAGCCTGGGCCGGCGCCTGCTGCTGCACATCACCGACGTGA TGCATGCCGGCGACGACCTGCCGCGTGTGCGTGAAGACGCCAGCCTGAGCGAGGCGCTGATGGAAATGAGCCGCAAGCGG CTGGGCATGACCGCCGTGGTGGACAACGACGAGCGCCTGATCGGGCTGTTCACCGACGGCGACCTGCGCCGCGCACTGGA CAGCGACATCGACGTGCGCAGCGCCGGCATCGCACAGGTGATGACGCGCAACCCGCGCACCATCGGCGCCGACCAGCTGG CCGCCGAGGCGGCGCGGCTGATGGAGGACTACAAGATCAACGGCCTGATCGTGGTCGATGCGCAGCAGCGCGCGGTGGGC GCATTGAACATTCACGACCTGTTGCGCGCCAAGGTGGTTTAA Protein sequence : MAVSHLPPATVSDASLVASGQRVLEIEREALANVGARIGSEFAAACRLVLASRGRVVATGMGKSGHVARKIAATLASTGT PAFFVHPGEAGHGDLGMITEADIVLALSYSGESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPL HLAPTSSTTASLAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSEALMEMSRKR LGMTAVVDNDERLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGADQLAAEAARLMEDYKINGLIVVDAQQRAVG ALNIHDLLRAKVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 6e-60 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-60 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 6e-60 | 44 |
