Gene Information

Name : XOO_1131 (XOO_1131)
Accession : YP_450160.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1227720 - 1228391 bp
Length : 672 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker; truncated

DNA sequence :
GTGATCCAGCAGATGATCCAGCAGTGGCAGGAGAAGGCCAGAACCGCCCGGCTGTGCCGGTTGCTGGGGGTGAGTCGTTC
GGGGGTGTATGCGGCGCGCCGACGGCGACCGGCTCCACGCGCTGATGTACTTGCGGCAGCGGTGCAGACGGCCTTCCAGG
CCAGCGGCGGCAACTATGGCAGCCGTCGATTGAGCGCCAGCCTGAAGGCCCAGGGCCTGCCCGCTGGTCGCCACCGGGTC
CGCCGCCTGATGAAGCGCCACGGGCTGAAGGCGCGCTGGAAACGCAAGTTCACCCACACCACCGACAGCCGGCACGACTT
GCCTGTGGCGGCCAACGTTCTGGATCGGCGCTTCAAGCCCAGTGCTGCGGACCAAGCCTGGGTGGCCGACATCACCTACA
TCCGCACCGAGCGCGGCTGGCTGTATCTGGCCGCCGTGCTGGACCTGTACTCGCGCAAGATCGTTGGCTGGGCGATGGCA
CCGAGCATGCCTGCCGAGCTGGTGTGCTGCGCCTTGCAGATGGCCATCGTCCTGCGCCAGCCCAAGCCGGGACTGATCAT
GCATACCGACCGCGGTAGCCAATACGCCAGTCAGGCCCACCGTGATCTGCTGGCGGCGGCTTCAACTCTGGATCGCAACA
CCAACGGTTATGACGTGGTCCAGGCGACCTGA

Protein sequence :
MIQQMIQQWQEKARTARLCRLLGVSRSGVYAARRRRPAPRADVLAAAVQTAFQASGGNYGSRRLSASLKAQGLPAGRHRV
RRLMKRHGLKARWKRKFTHTTDSRHDLPVAANVLDRRFKPSAADQAWVADITYIRTERGWLYLAAVLDLYSRKIVGWAMA
PSMPAELVCCALQMAIVLRQPKPGLIMHTDRGSQYASQAHRDLLAAASTLDRNTNGYDVVQAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tra5_2 AAC28569.1 transposase Tra5 Not tested LEE Protein 1e-25 43
unnamed CAC39293.1 hypothetical protein Not tested LPA Protein 7e-27 42
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-31 42
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-31 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-31 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-31 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 3e-30 41
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-31 41
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-31 41
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-31 41
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO_1131 YP_450160.1 transposase VFG1706 Protein 8e-32 42