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Name : XOO_0109 (XOO_0109) Accession : YP_449138.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Virulence Product : HrpF protein Function : - COG functional category : - COG ID : - EC number : - Position : 113766 - 116138 bp Length : 2373 bp Strand : + Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGTCGCTCAACATGCTTTCTACCGGGAGCAACCCCAGCCAACTGCTGGGCACCTCTTCCAACGAATCGTCTTCATCGGA ACTGTTCGGGTCGGATTCGTCCAACGATGGCTCCGACCTGCCATCGACGATGGATACCATCTTTCAGCAAATCTACCTAT TGCTGGCGGCCCTTCAGGCCAACACGCAAACCAGTGCATCCGGTGATACGCCGGCCAATACGGCAAGCGGCGATGCTGAC ACACAGATGTCCGCATCGGACTGGCAGGCCACCCAGCCGATCGAAAAGCGCACCTCCTGGCCATCCCTGGGCTACGACTT CGATCCCAAGAACATCAAGGGGAAGGATGCGCCGCCGGCGCTGGAGGGGTCGACGGTTACCTGGAACGATGGCACGCTGA CCAAGTCTGAGCTTCAGATCGTTTCGACGCTGAATGCACACAAGGATCAGATGCCGATCGAGTACAAGAATCTCGACGAC AAGATCAACGACCCTTCCACGCCCCCCGACCTGAAGGCTGCATTGCAGGGCCTGAAACAGGACCCGCGATTGTTCTTTGC GATCGGTTCTCAGGGAGACGGCAAGTGCGGCGGCAAGGTCAGTGCGCAGGATCTGTGGGATTTCTCTGATTCACATCCGC AGGTCAAGGACCTGGGCGGAAAGAACGACGAGTTCAATCCCAAGGACATCAAGGGGTCCAACCCGCCACAGGCGGCGGAG GGCTCGACGGTTACCTGGAACGACGGCCAGCTCAATCAATCCGAACTGGAGATTGTTTCGGTTCTGGATCGGCACAAGGA CCAGGTCGACTCGCTGTCCTTCGATCAGCTGGATGCCAAGATCAACGACCCGTCGACGCAGCCTGACTTGAAGAAAGCGC TGAAAGGATTGCAGAAGGATCCGCGGTTGTTCTTCGCCATCGGCTCGCAGAAGGACGGCAAGTGCGGCGGCAAGATCAAG GCGCAGGACCTCACAGACTTCTCGTACTACCATCCGCAGATTGCCGAATACAACGACAAGAAGGCAAAGAGCTACACGCA GAACTACATCGCATCCGATAGCCCCGACAAAACCAAGGCGTCGGTCATGACCAAAAGCGATGCCCTGCGCGAGATGTATC GCTATTCCGACTATCTGCCCGGCAACCTGAGTGAGGACGAATTCGCCAAGATCGTCGATGGCGACAGCAAGACCGGCAAG TGCCCACCGCAGTTGATCGCGGCTGCTCAATATTTTCGCGATCATCCGGACGAGTGGAAGGAATTTTCAGGAGACGCCGG CACGATGAGCACGCCGGACTTCCTGCAGAAGTCCACCTCCGAGATGCACCTGACTGCGGACGAGCAGAAGACGCTGGACA CCATCAACAGTCATCAGGACGCGTTCTACGGCGACGGCAAGGAACTCACGCGCGACAAGCTCGACGCGATCTCCAAGGAC AACAAGGCCGACCCGGCGGTCAAAGAGGCCGCAACACAGTTGGCGTCCGATCCGCTGCTGTTCGGCTTGTTGAACAACTC GATCACCGGCTACAAGAAACCCCATCACTTCTTCGGCGGCGGCCATGTCGTCGATTCGGGCAAGATCAGCCAGAACGATT TCCGGCAGTTCTATGACCACATGAGTGCAGCCAACAAGACCGTGAACACGCCGGCCACGCACGAGGCGAGCTCGCCCGAT CAGCAAAAGGCCGTCGCGGACATGCTGATGGGCAAGGACGATCCGCCGGCGATCAAGAAGCCCAAAAAGGATGTCGGCAC GTTCCAACAGGGCCTGCATGAGTTCCTCAAGTGGGACAGTAAGATCCTGGACTGGATGTCGGTCGGGCTCAGCGCATTGA ACGGAATTCCCGTGATCGGCGAGATTGCCGATGCGGCGGCGATTGCATTGGAGAGCGAGGCGCAGGCGGCGCAGGTGGTC GACACTGCGATTCAAGGTGGCGACATGTCGCTTGCCTTGAAGCTGGCCGGCATCAACATGGCCGGGGCAGTGGTTGGAGC AGTCGGTGGACCCACGGCCAGAATCGGGGCCAAGGAAGCCGCCGAGGGCGCGGCCAAAGGAACTGCAAAGGGAGCTGCCA AAGGCGCAGGTAAAACCGCGGCCGAACGGCCCAGCGCCGCTGCGTTCGCAAAAGGCTACGTGGCCGGCAGCACCATCAGT AAATCGACTGAAATTCTCAAGAAGCCCGTCATGGCGGGCTTGCACTACGAAGAATATCAGCTGGACAAGCAGAAGGACGG AGAGATCCACCAGAAGCTGGACAACGCCGGCGGCGCCCCGGTGGGTAAGCAGATTATCCCCACAGGCATCGCCGACAACT TCGAGGGAGACGTGCGGCAGAATCTGCGCAATGTCAGGATACGTCGCAGATAA Protein sequence : MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQANTQTSASGDTPANTASGDAD TQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDD KINDPSTPPDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQKDGKCGGKIK AQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGK CPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPD QQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVV DTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARIGAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAAFAKGYVAGSTIS KSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPTGIADNFEGDVRQNLRNVRIRRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | BAB07869.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrpF | YP_198705.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrpF | AAB86527.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 92 |
| hrpF | YP_362142.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 92 |
| hrpF | NP_640749.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 80 |
| hrpF | AAP34358.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 79 |
| XC_3025 | YP_244093.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 66 |
| hrpF | NP_636591.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 66 |
