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Name : XOO_0108 (XOO_0108) Accession : YP_449137.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : ISXoo6 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 112061 - 113044 bp Length : 984 bp Strand : - Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGCAACTGACCTTCGGAGACGCGGAGTACAACGGCAAGCGCAAGCGGACGCGGCGTGAGGTGTTCCTGGCCGAGATGGA TCAGGTCGTGCCATGGAAGGGCCTGCTGGCGCTGATCGAGCCGCACTATCCAAAGTCGGGGCAGCCGGGGCGACAGCCGT ATCGGCTGGAGACGATGCTGCGCATCCACTTTTTGCAGCAGTGGTATGCGCTGAGCGATCCCTCGGCGGAAGAAGCGCTG TACGACACGGTGTCGATGCGCCGCTTCGCGAAGATCGGCGGGCTGGACGAGGTGCCGGATGAAACGACGATTCTCCACTT CCGGCATCTGCTGGAGCGGCATGATCTGGCGCGTAAGCTGTTCAACCGGGTCAACGCGCACCTGTCGCGTAAAGGGCAGA GTCTGCGGGGCGGGACGATCGTGGATACCACGATCATTGCGGCGCCCAGTTCGACCAAGAACAAGCAGGGCGAGCGCGAT CCGGACATGCACCAGACCAAGAAGGGGAATCAATATGACTTCGGGATGAAGGCGCACATCGGGGTGGACGATGACTCCGG GCTGGTGCACCACGTCGAATGCACGGCGGCCAACGTGGCCGATATCACGCAAGCGCACAAGCTGCTGCACGGCAAGGAAG ACACGGTGTGCGGGGACAGCGGCTACACCGGGCTTGAGAAGCGCGAGGAAATGAAGCGCAAGCGCACGCTGCGCTACCTG ATCGCCGAGAAACCCTCGAAGCTGAAGCAGATCAAGAACAAACGCGAACTGAAGTTGGCCAAGCGCTGGGAGCACACCAA GGCCAGCCTGCGGGCGAAGGTGGAACACCCGTTCCGGGTGATCAAGCGTCAGTTTGGCTACGTCAAGGTGCGCTATCGCG GCCTGGTCAAGAACACCGCGCAGATGCTGACGCTGTTTGCGCTGTCGAATCTGTGGCTGAAGCGCAAAGAGTTAATGCCT GCTGCGGGGAATGTGTGCCTGTAA Protein sequence : MQLTFGDAEYNGKRKRTRREVFLAEMDQVVPWKGLLALIEPHYPKSGQPGRQPYRLETMLRIHFLQQWYALSDPSAEEAL YDTVSMRRFAKIGGLDEVPDETTILHFRHLLERHDLARKLFNRVNAHLSRKGQSLRGGTIVDTTIIAAPSSTKNKQGERD PDMHQTKKGNQYDFGMKAHIGVDDDSGLVHHVECTAANVADITQAHKLLHGKEDTVCGDSGYTGLEKREEMKRKRTLRYL IAEKPSKLKQIKNKRELKLAKRWEHTKASLRAKVEHPFRVIKRQFGYVKVRYRGLVKNTAQMLTLFALSNLWLKRKELMP AAGNVCL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 1e-97 | 63 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 6e-71 | 59 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 8e-71 | 59 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 3e-58 | 55 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 2e-57 | 46 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 2e-57 | 46 |
