Gene Information

Name : rph (XOO_1040)
Accession : YP_450069.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1133530 - 1134255 bp
Length : 726 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGACCTTTTCCCGTCCCAGCGGCCGCACGGCCGACCAGCTGCGCCCGGTGCGCATCGAACGCGCCTTCACCCGCCATGC
CGAAGGCTCGGTGCTGGTCAGCTTCGGCGACACCCACGTGCTGTGCACCGCCAGCGTGGAAAACCGCGTGCCGAATTTCC
TGCGCGGCAAGGGCGAAGGCTGGGTCACCGCCGAATACGGCATGCTGCCGCGCTCTACCCACACCCGTTCCGACCGCGAA
GCCGCACGTGGCAAGCAAGGCGGGCGCACGCTGGAAATCCAGCGCTTGATCGGCCGCGCACTGCGCGCCTGCGTGGACCG
CAATGCGCTCGGCGAGCGCACCATCACCCTGGACTGCGACGTGCTGCAGGCCGATGGCGGCACCCGCACGGCAGCCATCA
CCGGCGCCTACGTGGCGCTGGCCGATGCGGTGAACCTGCTGCTCAAGCGCGGCGAGATCAAGAAGCACCCGCTGATCGGC
GCGGTGGCGGCGGTGTCGGTGGGCATCTATCGCGGTGAGCCGGTGCTGGATCTGGATTACCCGGAAGACAGCGACTGCGA
TACCGACATGAATGTCGTGATGAACGATGGTGGCGGCTTCATCGAGCTGCAGGGCACAGCCGAAGGCCATGCGTTCCGTC
GCGACGAACTCAACGCGCTGCTCGCACTCGCCGAAAAGGGCATGGGCGATTTGTTCGCACTGCAACGCGCTGCGCTGGCC
GGATGA

Protein sequence :
MTFSRPSGRTADQLRPVRIERAFTRHAEGSVLVSFGDTHVLCTASVENRVPNFLRGKGEGWVTAEYGMLPRSTHTRSDRE
AARGKQGGRTLEIQRLIGRALRACVDRNALGERTITLDCDVLQADGGTRTAAITGAYVALADAVNLLLKRGEIKKHPLIG
AVAAVSVGIYRGEPVLDLDYPEDSDCDTDMNVVMNDGGGFIELQGTAEGHAFRRDELNALLALAEKGMGDLFALQRAALA
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-63 62