Gene Information

Name : XOO_1016 (XOO_1016)
Accession : YP_450045.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : ISXoo3 transposase orfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1115060 - 1115323 bp
Length : 264 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
GTGAAGAAGCGCTTTTCCGAAGAGCAGATCATCGGCTTCCTGCGCGAAGCCGAGGCCGGCATGCCGATCAAAGACCTGTG
CCGACGGCATGGCTTCAGTGAGGCTTCCTACTACCTGTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGC
GGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGAAGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTGATCAAG
GATGCGCTGCAAAAACAATGGTGA

Protein sequence :
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIK
DALQKQW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 3e-25 70
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-25 70
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-25 70
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 8e-26 70
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-17 49