Gene Information

Name : XOO_0103 (XOO_0103)
Accession : YP_449132.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG4457
EC number : -
Position : 105243 - 107228 bp
Length : 1986 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGAAACTCTCCGGCGGTATCGAGGCCGCTTCCAGTAGCGGCGCAGCCTCGCACCCTCCTGTAGAACCAACGCAGGCCGA
AGACGTTGATGCCCCGCGGGAAGAACACGCACAGACTGAACCGCTTTGGGGCTTGACCTCTTCCAGCACGGCGCTGCGCA
GTCGTCGCACATCTTTGAGCGGTCGCTCCAGGCCTCACGCAGATGAAGAAGGGGCCACGCTCGGCGGCTCACATCCGCAG
TCGTCGCAATCGTCGGGCGCCAGATTTTACACCGCAGAGGTCGTGTCCCAAGTCCAGGAAATCAACGCACCGGCTGTACC
TGCCGCCGCGGCGACCTATGCCGAGCGCAGCACGGCGGCGGCCGCCGAGGTGAAAGCGCAGCTACGCGCCCGTCTGGACG
CTCTGCCATTTGCTGCGCCCTCGAAAGAGCAGACCGCCCTGCAGGCGAGCTATCTGGAATGGGCTGACGCACGCGTGCAG
GAACGCATCACTGCCTTCGGGCCGGATGCCGGGTACCAAGCTGTCGGTGACATGAAGACAGCGGGCACAAAAGCGGCATT
GCCGATTGCCTACCAATGTCTACGGTCGTTCATTATCGGTGCGATGCGTAATCCGGTCGGTCTGGCGACGGGTGCGGCCT
ATGCGGCCCGGCGCCCGATTGGCGCGGAGGAGCTGAGTACGGTGATGGTGTCGGGTGTCGCGGCGGGGTCGGCGTCCTAT
ATCAGCGATACTTTGTTGATCCCGGCAATGGACCGGCGCACGCGCGTTGCCAACATGCCGAAGTTTCAGGCCGTCGACCC
CAAAATCCTGGCGCCAGATCCACCACCGGTCATTCTGGAAGTGACCGCTGAAGGCAAGCGCTTCACGCGTCCGGGCGATA
ACGATGCGCCGACGCTTGCCGAACTCAAGGCCCAGACCTACGACCGCCGCCTGGAGATCACGCAGCTCCAATCGAACCTG
GACGACAAGTCACTCAATACCTTGTTGCTCAAGCCAGTGATCAACGGAATATTCAATGCCGCGCGCCGGACTGGTGGTAA
TCCGGATTTGCTGACGCCTGCCGGCCAGCTGGGGTTCAGCGCACTCGCCATTGGCGGCGCCGGAATCGTTCAAAAGACAT
TGCTTGAGACAGGCAAAGCTGTGGCACGGACCGGCCAAATGAGTGTCCCGGATCTAGTTGGCGGAGAGCAACGGCTGAAT
CTGTTCGCATTGGCGTTGCCCGACAAAGAGCGCCGGCCTGCACAATGGTCCGACGCCGTGCATTTCCCGCCTAGATATTT
GCTGGACACCGGAAAGGAAGCGTTGGCGTTGGCAAGGCAGGGCATCAACAGCGCAAACGCGATCGCCACCACGACCCGCG
ACCTGTTGACCCGCCACATGCTGAGCAATGTCATTTCCAGCTTCGCCTCGATGGGGGCTGCGCGCATCATCACAGCGCCG
TTGCGTGGGGGGAGCCACACACGTGTTGCTGGCGAAGCCGCCAATTCCAGGGCTGTGGTCGCGCAGCAGGCCGTGCAAAC
CCTGTTCAACGATACGTTATGGAATGCGCTCAAGGCCAAGAATGGCACCAATACCTCCCAGGCGGCGCGCCTGGACAACG
AACGTGCCGTGCTTGCAGCCAAGCATCAACGCACAATCGAACAAACCATCGAGGCCCTGGCCGAGCCCGTGGGTCAGGCG
ATCGCCACGCTTTCGGATCAGACACGTGCCATGGAGGAGGGGATGCGCGTCGCGCCTGGCGCTTGGCTGCGTGGCCAGAC
ACTGCGTACCGCCCTGCAGGCATTGCTTAAAGAGATCCGCGCGCAGTCCGTCTCGATCGCGACCATCGATGCGGTACGCA
CTGCACTGCGCGAGGAGGGGGGGCAAACGTCTAGAGCCGTGCCCCCCGACGCGGCCACGCATGCACTGGATGGTCAGCTG
CAAACGCTCAAGCGTGCACTGCATGACAGCGAAGAACTCCGCCAGTGGCAAAGCGGGCGAGCATGA

Protein sequence :
MKLSGGIEAASSSGAASHPPVEPTQAEDVDAPREEHAQTEPLWGLTSSSTALRSRRTSLSGRSRPHADEEGATLGGSHPQ
SSQSSGARFYTAEVVSQVQEINAPAVPAAAATYAERSTAAAAEVKAQLRARLDALPFAAPSKEQTALQASYLEWADARVQ
ERITAFGPDAGYQAVGDMKTAGTKAALPIAYQCLRSFIIGAMRNPVGLATGAAYAARRPIGAEELSTVMVSGVAAGSASY
ISDTLLIPAMDRRTRVANMPKFQAVDPKILAPDPPPVILEVTAEGKRFTRPGDNDAPTLAELKAQTYDRRLEITQLQSNL
DDKSLNTLLLKPVINGIFNAARRTGGNPDLLTPAGQLGFSALAIGGAGIVQKTLLETGKAVARTGQMSVPDLVGGEQRLN
LFALALPDKERRPAQWSDAVHFPPRYLLDTGKEALALARQGINSANAIATTTRDLLTRHMLSNVISSFASMGAARIITAP
LRGGSHTRVAGEAANSRAVVAQQAVQTLFNDTLWNALKAKNGTNTSQAARLDNERAVLAAKHQRTIEQTIEALAEPVGQA
IATLSDQTRAMEEGMRVAPGAWLRGQTLRTALQALLKEIRAQSVSIATIDAVRTALREEGGQTSRAVPPDAATHALDGQL
QTLKRALHDSEELRQWQSGRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XOO0074 YP_198713.1 hypothetical protein Not tested Hrp PAI Protein 0.0 100
xopF1 YP_362145.1 outer protein F1 Virulence Hrp PAI Protein 0.0 83