Gene Information

Name : XOO_0100 (XOO_0100)
Accession : YP_449129.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Virulence
Product : HrpE1 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 104022 - 104303 bp
Length : 282 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGGAAATACTTCCGCAAATCAGCTCACTTAATTCGCGCTTCCAACAGGGTATGGATGGCTATACCGGAGGTGTGGCCAA
TGGAATCTCCGGTGCTTCTGCACTCTCTGGCTCGAACGGGCAGATGGGTTCGTTGCTCGGCGACATGAGTGCCTCGGACG
AGGCTCAGAAGTCCATGAACAACAAGATCACGCAGCTCAAAAACGATCTTGACTTCAACGTGGCACTCAACAAGTTCATC
GGCAAGGCGGGCGACAACGCTAAGCAGCTCGTTGGCCAGTAA

Protein sequence :
MEILPQISSLNSRFQQGMDGYTGGVANGISGASALSGSNGQMGSLLGDMSASDEAQKSMNNKITQLKNDLDFNVALNKFI
GKAGDNAKQLVGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpE YP_198715.1 hypothetical protein Virulence Hrp PAI Protein 4e-36 100
hrpE BAB07867.1 HrpE Virulence Hrp PAI Protein 3e-36 100
hrpE AAP34354.1 HrpE Virulence Hrp PAI Protein 1e-32 88
hrpE YP_362148.1 HrpE protein Virulence Hrp PAI Protein 2e-29 83
hrpE NP_640752.1 HrpE protein Virulence Hrp PAI Protein 6e-32 83
hrpE AAD21326.1 HrpE Virulence Hrp PAI Protein 1e-29 83
XC_3021 YP_244089.1 HrpE protein Virulence Hrp PAI Protein 1e-11 50
hrpE NP_636595.1 HrpE protein Virulence Hrp PAI Protein 1e-11 50