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Name : Msp_0477 (Msp_0477) Accession : YP_447520.1 Strain : Methanosphaera stadtmanae DSM 3091 Genome accession: NC_007681 Putative virulence/resistance : Unknown Product : type I restriction-modification system, restriction subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 559329 - 562037 bp Length : 2709 bp Strand : - Note : COG0610 DNA sequence : ATGTCAACACAATCTGAATCAGCATTAGAAGATATACTAGTAGATGATCTAGCAAACAATGGTTATGAAAAAATCACTAT AAGAAATGATGAAGAATTAGAACAAAACTTTAGAAGACAACTAGAAAAATTCAACAACATAACATTCACAGATGATGAAT TTGAAAAAATATTGCTCTTTCTAAAACAGGGAACCATATTCGATAAAGCACAAAAACTAAGAGACAGTTACACACTCCAA AGAGAAGGACAGGCAGACAAATGGATAAGATTTATCAATAAAGACGAATGGTGCAAAAACTACTTCCAAGTAGCACACCA AATAAAATCAAAGAACAAACACAACTTCAGATATGATGTAACATTACTCATAAACGGACTACCACTAGTGCAAATAGAAC TTAAAAAACGTGGCGTGGAAATCAAACAGGCATTCAACCAAATCAAAGAACGATACCTGCCAACATTCAAAGGACTATTC CAATACATACAAATATTCGTAATAAGCAATGGTGTAGACACCAAATACTTTGCAACAGGAATACCAAGCTCCATGAAATT TGAATACACATATTTCTGGAAAAACAAAGAAAACCGCAACATCAAACAATTAGCAGAATTCTCACAAACATTCCTAGAAA AATGCAACCTCGCCAAAATGATAACACAATTCATGGTACTAAACCAAATAGACAAAAACATCATGATACTAAGAGCATAC CAAAAATATGCCGTAGAAGAAATAATAAGACAAGCAACCAAAATCAAACAAAACGGTTACGTATGGCACACCACAGGAAG TGGAAAAACACTAACCTCATTCAAAACCAGCCAAATACTATCAGAAGACCCAAATATTGACAAGGTAGTATTTGTTGTAG ACAGAAAAGACCTGGATACACAAACAATGAAACGGTTCAACCAGTACGAAAAAGACAGTGTAGCAAAAGTATACAATACC TATTCATTAATTAAAAAACTTAATTCATCAAAAACTAAACTTATCATCACAACGATACAGAAATTAAGCAATGTTGCAAC TAAACATCAAACTAAAGTAGCACAAATGAAAGACAAAAGAATCATCTTCATATATGATGAATGTCACAGATCACAATTCG GAAAAATGCATCAAAGCATAATAGATTTCTTCACAAACAGTCTATGCTTCGGATTTACAGGAACACCAATATTTGTAGAA AATTCCGGAGGAAACAAAACAACAAAAACAATATTCGGAAAAAGACTACACACCTACATGATAAAAGACGCAATAAGAGA CAACAACGTACTAGGATTCTCCATACAATACTATGAATCAGTTCCAATAAGCAAAGATGACGTAGACGTAAACTCATTAG CATATGAAGAAATGTTAATGAAAGATAAACGACTGGAAAAAAATGTGGAAAAACTGCTTGAAACATATCCTAGTAAAACA CATAACGGTAAATTCAATGCCATGTTTACTGTATCACGAGGAAAATTTATAAACAAATACTACAGAATACTAAAAGAAAA AGCACCTGAACTTAAAATAGCAGCAATATACAATGCTAACCCAAATTCAGAGGATACCAATGGAAAATCAGATTACTCAT ACCTTTCAGAATATATGGAAGACTACAACCAAACATTTGGAACCAACTTCAGTCCAGAAACATTTAAAGAATACAACATA GACATATCTAACAGAATGGAAAAAAGAGAAATCGACCTCTTACTAGTAAAAGACATGTACACAACAGGATTTGACTGCCC AAGACTAAACACATTATACGTGGATAAAAACCTACAGTACCACACATTATTACAAACATTTTCCAGAACCAACCGTATAT TCGACAAAAGCAAAGCTTATGGAAACATTATCTGCTTTAGAGATATAAGTGCAGAAACAGATGAAGCATTAACCTTATTC TCAGACAACGAACCATTAGAAGATCTATTAATGAAAGACTACCAAACATATGTGGATGAATTCAATGAAGCATACAAAAA GTTCCTTGAGTTGACACAAACAGTTGAAGATGCACAAAACCTAGAAAGTGAAACAGAAATAAAAGAATATGTAGAAAACT TCCGTGAATTAAACAGAATAAAAAGCAAACTAGACACATTCCCAGAATTCACCTTCGATGACTTGGATATGGATGAACAA GAATACAATGACCACAAAAGCGTATACCTCGACATATACGATGAAATTAAAAATGATGGAGAACCAGAATCACCACTACA TGACATTGACTTCGAACTTGAATTAATACGTGATGACACTATTAATGTGGATTATATTCTTGGATTGTTAAAATACTTGA ACAAAGATGATGCAAATTATGAAAAAGATCTTGAAAGAATTAAGAAAATCACCAAAGAAACAGAACAATTAAGAAATAAA AACACATTGATAGAAAAATTCATTGAAAAAGTACTGGGAACTTTTGATAGAACAGAAATGACTGTAGAGGAAAAATTCTA TGAATTTATGAGAAACGAACGTAGACAAGCATTCTGTAACCTCATAGAAAAAGAAAATCTAGATGAAACTGCAACACGTA AACTAATTGATGAATACCAATTCTCAGGAATAATGGATACCACGATGATAGAAGCAAGTTTCATCAATAAACCTAAATTC AAAGAACGAAGAGTAAAAAGAAACAGAATAAAAGAAGAATTATTAGAAATATTCGAAATATATGACTAA Protein sequence : MSTQSESALEDILVDDLANNGYEKITIRNDEELEQNFRRQLEKFNNITFTDDEFEKILLFLKQGTIFDKAQKLRDSYTLQ REGQADKWIRFINKDEWCKNYFQVAHQIKSKNKHNFRYDVTLLINGLPLVQIELKKRGVEIKQAFNQIKERYLPTFKGLF QYIQIFVISNGVDTKYFATGIPSSMKFEYTYFWKNKENRNIKQLAEFSQTFLEKCNLAKMITQFMVLNQIDKNIMILRAY QKYAVEEIIRQATKIKQNGYVWHTTGSGKTLTSFKTSQILSEDPNIDKVVFVVDRKDLDTQTMKRFNQYEKDSVAKVYNT YSLIKKLNSSKTKLIITTIQKLSNVATKHQTKVAQMKDKRIIFIYDECHRSQFGKMHQSIIDFFTNSLCFGFTGTPIFVE NSGGNKTTKTIFGKRLHTYMIKDAIRDNNVLGFSIQYYESVPISKDDVDVNSLAYEEMLMKDKRLEKNVEKLLETYPSKT HNGKFNAMFTVSRGKFINKYYRILKEKAPELKIAAIYNANPNSEDTNGKSDYSYLSEYMEDYNQTFGTNFSPETFKEYNI DISNRMEKREIDLLLVKDMYTTGFDCPRLNTLYVDKNLQYHTLLQTFSRTNRIFDKSKAYGNIICFRDISAETDEALTLF SDNEPLEDLLMKDYQTYVDEFNEAYKKFLELTQTVEDAQNLESETEIKEYVENFRELNRIKSKLDTFPEFTFDDLDMDEQ EYNDHKSVYLDIYDEIKNDGEPESPLHDIDFELELIRDDTINVDYILGLLKYLNKDDANYEKDLERIKKITKETEQLRNK NTLIEKFIEKVLGTFDRTEMTVEEKFYEFMRNERRQAFCNLIEKENLDETATRKLIDEYQFSGIMDTTMIEASFINKPKF KERRVKRNRIKEELLEIFEIYD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0054 | YP_300144.1 | type I site-specific restriction-modification system restriction subunit | Not tested | SCC15305cap | Protein | 9e-177 | 42 |
