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Name : thiC1 (Msp_0228) Accession : YP_447288.1 Strain : Methanosphaera stadtmanae DSM 3091 Genome accession: NC_007681 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : 2.5.1.3 Position : 286378 - 287667 bp Length : 1290 bp Strand : + Note : thiamine biosynthesis protein 1; required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : TTGACTCAATTAGAATATGCAAGAAAAGGAGAAATAACTCCTGAAATGGAATATGTAGCAAAAACTGAAAATATAGATGT TGAAAAATTAAGAAAAAATATAGCTTCTGGAAAAGTAGTTATACCAAAAAATGTGCATAATAATACTCTTCCAACTGGAA TTGGTAAAGATTTACATACAAAAATTAATGCAAATATAGGATCATCTACAGAAATGGAAGATATTAATGTAGAGCTAGAA AAACTAGATATACTACTAAAATATGGTGCAGATGCTGTGATGGATTTAAGTACTGGACCAAAATTACATGAAATCAGAAA GGCAATAAGAGACAAAACAAATATACCTCTAGGAACAGTTCCAATATATGAAGCAGGAGTAGAAACAACTTCTCAAGATA AAATTATTGTAGATATGGATGATGATATTATCTTTAAAACAATAATAAATCAAGCAAAAGAAGGTGTTGACTTTATAACA GTACATTGTGGGATTACACAAGATGCAATAAAAGCAGTTGATGATTCAGAAAGATTAATGGGAATAGTAAGTAGGGGTGG AGCTCTAACAGCTGCATGGATCATGCATAATGAAAGAGAAAATCCATTATATGCAGAATATGATTATTTACTAGAAATAT GTAAAGAACATGATGTAACACTCTCTCTAGGTGATGGTTTAAGACCAGGTTGTATTCATGATGCAACTGATATTGCACAG ATAAGAGAATTAACAACACTAGGAAGACTTGTAAAACGTTCACAAAAAGCTGGAGTACAAGTGATGGTTGAAGGACCAGG TCATGTTCCTATAACACAAGTAAAGGCAAATATGCAAATACAAAAAACCATATGTTCAGATGCACCATTCTATGTTTTAG GACCTTTAGTAACAGATGTTGCACCAGGTTATGATCATATTACAGCAGCAATAGGTGCAAGTATTGCAGGTGCAAGTGGG GCTGACTTTTTATGTTATGTTACACCTGCAGAACATCTGTGTATACCAAATAAGGAACATGTAAAACAGGGTGTTATAGC TTCAAAGATTGCTGCAGAAGTATCTGATATAGCCAAACAAATACCAAGTACAATGAAAAGAGAATATGATATGGCTGTTG CAAGGGATAACTTTGACTGGGAAAAACAATTTGAATTGGCAATTGATGGAGAAACTGCACGTAAGTATTATGAAAGTACA TCTACATCTGATGAGGAGATGTGTAGTATGTGTGGAGATTTCTGTGCTATAAAAATGGTTAAAGATCATGAAAAAGCAAA TAAGAATTAG Protein sequence : MTQLEYARKGEITPEMEYVAKTENIDVEKLRKNIASGKVVIPKNVHNNTLPTGIGKDLHTKINANIGSSTEMEDINVELE KLDILLKYGADAVMDLSTGPKLHEIRKAIRDKTNIPLGTVPIYEAGVETTSQDKIIVDMDDDIIFKTIINQAKEGVDFIT VHCGITQDAIKAVDDSERLMGIVSRGGALTAAWIMHNERENPLYAEYDYLLEICKEHDVTLSLGDGLRPGCIHDATDIAQ IRELTTLGRLVKRSQKAGVQVMVEGPGHVPITQVKANMQIQKTICSDAPFYVLGPLVTDVAPGYDHITAAIGASIAGASG ADFLCYVTPAEHLCIPNKEHVKQGVIASKIAAEVSDIAKQIPSTMKREYDMAVARDNFDWEKQFELAIDGETARKYYEST STSDEEMCSMCGDFCAIKMVKDHEKANKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-80 | 45 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-80 | 45 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 2e-80 | 43 |
