Gene Information

Name : Msp_0121 (Msp_0121)
Accession : YP_447183.1
Strain : Methanosphaera stadtmanae DSM 3091
Genome accession: NC_007681
Putative virulence/resistance : Resistance
Product : cation transport ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 135311 - 137506 bp
Length : 2196 bp
Strand : +
Note : COG2217, pfam00122

DNA sequence :
ATGGTTCATTGTGAAAAAAATGCTCACTACAATAAGGATCTATTAAAAAACTTCCAAGAAAAAACAAATTTCAAAGAATA
TGAACATAACAACGTTGATACTAAAGTAGATAAAATATGTGACTGTGCAGACGACTGTTGTACTGGTAATACACACCATG
AACACAACCATGAACATAATCATGAACACAACCATGAACACAATCACGAGGACTGTTGTGATGATGATTGTTGTAGTGAT
ATAAAAATATGTAACTGTGGAGATTGTGATGATGATGATGAAGAGGAAGAAGAAGTAATTAAAGAAGGAATACCTCTTCT
TAAAAATCGTTCAATACAAATTATAGTAAGTAGTGGAATACTATTTGCACTAGGACACTTACTTGAATACTTCTCAGTAT
TTGGGGGAACTCTTGCAACAGTAATATTTGCAATAGGTGCAATAATAGCAGGATATGATATTGCAAAAATGGCAAAAAAA
GCAGTGTTTACAAGACATACAATAACTCCAGCAGTATTGATGTGTATTGCAGCAGTAGCATCATTTTTAATAGGTCATCC
TGAAGAAGGTGCTGCTGTAACATTTTTATACTTTATAGCAGAATTCTTAGAAGATTATTCAGAACAAAGAGCACAACATT
CAATTAAATCATTGGTAGAAATAGCACCTGAAAAAGCACGTCTGAAAGTAGGAAACACTGTAGAAACAGTATCTATTGAT
GAGGTTAAAGTAGGAGAAATTGTAATAGTAAAACCAGGGGATAAAGTACCATTAGATGGTAAGGTAATAGAAGGAGTATC
TACAATCAACCAATCATCAATTACTGGAGAGAGCATACCAGTAACAAAAACAATTAAAGATAAAGTATTTGCAGGAACAG
TAAATCAAGATGGATATCTTGAAATAGAAGTTACAAAAGCATCAAAAGATAGTGTAATATCTAAGATTGTAACACTGGTA
AAACAATCACAACTAAATAGATCACACACAGAAACATATGTTGAAAAAATAGCAAAATACTATACTCCAGCAATAATTAT
AATAACCATATGTGTAGCAATAATTCCGCCATTATTCTTTGGAGAAAACATTGTAGATTGGATATACAGGGCATTATCCC
TTATGGTAATATCATGTCCATGTGCATTTTTAATATCAACACCAATTGGAATGGTCTCTTCAATAACCTCTGCAACAAGA
CAAGGAGTGTTAATTAAGGGAAGTAGCTATGTTGAAGAAATGCGTAATATTAAAGCAGTAATATTTGATAAAACAGGTAC
TTTAACCGAAGGAAAACTTGAAATTATGGATATTGATGTTTTAGATGATAAATATACAAAAGATGATTTAATAGAAATAG
CATCTTCTCTTGAAAAAAAATCTACACATCCTATAGCAACAGCAATAGTAAATCATGCTAAAGACAATAATCTTCAAATT
AAAGAAGTTAAAAACTTTAAAAATATTCCAGGAAAAGGTATTGTAGGATACATTAATAACAAACAATACTATGCAGCAAA
TGAATCACTTATAGAGAATAGTGAATTTATAGTATCAAGAGAAACAGTAATTAACTATGCTAGTGATGGAAAAACTGTTG
TCTTTATAGGAAATGAAGAAAAAGTCATAGGTATAATCACTGTAATGGATAAAATTAGAGATGAATCTGAAGAAGTAATC
AGAAACTTAAATAATGCTGGTGTAAAAACAGTAATGTTAACTGGAGATAATAAAATTGCAGCCCATGCTGTATCAGATAA
AATAGGTGTAACTTATATCTACTCAGACCTATTACCTGAAGATAAATTGAATATAGTTGATACTATACGGAATAAATTTG
GTGATGTTGCAATGGTGGGAGATGGAATAAATGATGCACCAGCACTTGCAAGATCTAATGTTGGAATTGCAATGGGTGCT
GCAGGATCTGATGTTGCAATAGAAACTGCAGATGTAGCACTTATGCAGGATGATTTAACAAAGTTACCTTACTTATTTAG
TTTAAGTACTAAAACAATGAGTATTATTAAACAAAATATTATAACAGCAATATCAGTTAAATTTCTATTTGTAATACTAG
CTATACTTGGTTTAATTACTTTGATGATGGCAGTAGGTATTGGAGATATGGGATTAACGCTTCTTGTTATTCTAAACTCA
TTTAGAATTGGAAGAGTTAAAGATCCTATTTTCTAA

Protein sequence :
MVHCEKNAHYNKDLLKNFQEKTNFKEYEHNNVDTKVDKICDCADDCCTGNTHHEHNHEHNHEHNHEHNHEDCCDDDCCSD
IKICNCGDCDDDDEEEEEVIKEGIPLLKNRSIQIIVSSGILFALGHLLEYFSVFGGTLATVIFAIGAIIAGYDIAKMAKK
AVFTRHTITPAVLMCIAAVASFLIGHPEEGAAVTFLYFIAEFLEDYSEQRAQHSIKSLVEIAPEKARLKVGNTVETVSID
EVKVGEIVIVKPGDKVPLDGKVIEGVSTINQSSITGESIPVTKTIKDKVFAGTVNQDGYLEIEVTKASKDSVISKIVTLV
KQSQLNRSHTETYVEKIAKYYTPAIIIITICVAIIPPLFFGENIVDWIYRALSLMVISCPCAFLISTPIGMVSSITSATR
QGVLIKGSSYVEEMRNIKAVIFDKTGTLTEGKLEIMDIDVLDDKYTKDDLIEIASSLEKKSTHPIATAIVNHAKDNNLQI
KEVKNFKNIPGKGIVGYINNKQYYAANESLIENSEFIVSRETVINYASDGKTVVFIGNEEKVIGIITVMDKIRDESEEVI
RNLNNAGVKTVMLTGDNKIAAHAVSDKIGVTYIYSDLLPEDKLNIVDTIRNKFGDVAMVGDGINDAPALARSNVGIAMGA
AGSDVAIETADVALMQDDLTKLPYLFSLSTKTMSIIKQNIITAISVKFLFVILAILGLITLMMAVGIGDMGLTLLVILNS
FRIGRVKDPIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 1e-114 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msp_0121 YP_447183.1 cation transport ATPase BAC0298 Protein 1e-97 43