Gene Information

Name : Msp_0120 (Msp_0120)
Accession : YP_447182.1
Strain : Methanosphaera stadtmanae DSM 3091
Genome accession: NC_007681
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 134798 - 135172 bp
Length : 375 bp
Strand : +
Note : smart00418, cd00090, pfam01022

DNA sequence :
ATGAAAGAAGATAACTTATTCAATGTCGGAGATGACACATGTGATATAACAGTATTACATGAAAAACCAATAAGAAGAGC
AAAAGAACAATTAATGAGTGAAAATACATACATGGAATTATCTGAGACATTTAAAATCTTTGGAAATCCAACAAGACTTA
AAATTCTATCATTATTGTCTGTAGAAGACTTGTGTGTATGTGATATATGTGAAATATTAAATATGAGTCAATCAGCAGTA
TCACATCAACTAAGAACATTAAGAAGTAAAAATCTAGTAAAATATACAAAAGAAGGAAAACAAGCAAGATACTCTCTAGC
AGATAAACATGTTGTACAAATATTAAAAATAGGAATAGAACATGTATTAGAATAA

Protein sequence :
MKEDNLFNVGDDTCDITVLHEKPIRRAKEQLMSENTYMELSETFKIFGNPTRLKILSLLSVEDLCVCDICEILNMSQSAV
SHQLRTLRSKNLVKYTKEGKQARYSLADKHVVQILKIGIEHVLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 5e-17 41
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 5e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msp_0120 YP_447182.1 transcriptional regulator BAC0281 Protein 5e-12 41