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Name : Msp_1000 (Msp_1000) Accession : YP_448031.1 Strain : Methanosphaera stadtmanae DSM 3091 Genome accession: NC_007681 Putative virulence/resistance : Unknown Product : nitrate/sulfonate/bicarbonate transport system ABC transporter ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 1148459 - 1149220 bp Length : 762 bp Strand : - Note : COG1116, pfam00005, cd00267 DNA sequence : ATGAAGTTGACATTTGAAATAAAAAATATATCAAAAAAATTTACTTCTGAAAATAAGGAAAACTATGCATTAAAAGACAT TAATTTAACAATAGAAACTGGTAAATTTGTCTGTTTTGTTGGACCATCAGGTTGTGGAAAAACAACACTACTAAGATTAA TAGAAGGATTTGAAAAACCTACTGAAGGAACAATTACAGATGATGATAAAGTAGTAGAGCAACCTTCAAAAGATAGAGGA TTTATATTCCAGGATTATTCATTATTTCCATGGCTTACAGTTATGGATAATGTAACATTTGGATTAAAGATTGCTGGAAA ACCAAAGGAAGAAAATACAAAACGAGCACTCGAATATCTTGATGCTGTAGGACTAAAAGATTATGCAAATAGATATCCTC ATGAATTATCTGGGGGTATGAAACAACGTGTTGCAATAATTAGATCAATAATTAATGATTCTAAAACACTACTTATGGAT GAACCATTTAGTGCATTGGATGTACTAACAAAAAGAAAATTACAAACCCAATTAGTTGATAATTGGATGTCTAAAAATAG AACAATCATATTTGTAACACATGATGTTGATGAAGCAATATATCTTGCAGATGAAATAGTTGTATTTTCAACAAGACCAG GATCTATTAAGAAAATTATTAAGAATGATTTACCAAGACCTAGAAATAGAACATCACGAGAATTTAATGACTTAATTACA GAAGTTACAAAATATATAGATGAATCAGATATAATTGTCTGA Protein sequence : MKLTFEIKNISKKFTSENKENYALKDINLTIETGKFVCFVGPSGCGKTTLLRLIEGFEKPTEGTITDDDKVVEQPSKDRG FIFQDYSLFPWLTVMDNVTFGLKIAGKPKEENTKRALEYLDAVGLKDYANRYPHELSGGMKQRVAIIRSIINDSKTLLMD EPFSALDVLTKRKLQTQLVDNWMSKNRTIIFVTHDVDEAIYLADEIVVFSTRPGSIKKIIKNDLPRPRNRTSREFNDLIT EVTKYIDESDIIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-32 | 41 |
