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Name : SRU_0085 (SRU_0085) Accession : YP_444238.1 Strain : Salinibacter ruber DSM 13855 Genome accession: NC_007677 Putative virulence/resistance : Resistance Product : AcrB/AcrD/AcrF family transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 101639 - 104689 bp Length : 3051 bp Strand : + Note : identified by match to protein family HMM PF00873; match to protein family HMM PF01849 DNA sequence : ATGGACATCGCCAAGGCCGCCATTGAGAACCGAACGCTGACGTACGTCACCACGTTGCTCGTGGTGGTGGGGGGCGTCAT TGCGTTCCTGAACCTGGGGCGCCTGGAGGATCCGGAGTTTACCATCAAGCGCGCCCTGGTGGTGACCCAGTACCCCGGGG CGACCGCCCACGAGGTGGAGGCGGAGGTGTCCGACCCCATCGAGGAGGCCGTTCAGGCAATGGGAAAGGTGAAGGAGATC AAGTCCCGCTCCAGCCGGGGGCGCTCGACCCTGGAGGTCGAGATGAAGAGTGACGTCATCGGGGATGCGGTGACGCAGGC CTTCGACGACCTGCGCGACAAGGTCAACGACGCTCAGGGACGCCTGCCGCCCGGGGCGGGCCCGTCCGTCGTGGAGGACG ACTTTGGGGACGTGTACGGCATCTTTATGGCCATTACCGGGGAGGGCTACAGCAAGCAGGAGCTGAAGGACCACGCGGAG GCCTTGAAGCGGGAGCTGGTGCAGGTGCAGGGCGTCGCGAAAGTTCGCCTTTTTGCGGACCGACAGGAGACCATCTACGT CGAGCCGAACCGCGACCGGTTGTCGAACCTGGGGATCAGTGTCGACCGGATCGCGGGAAGGCTGCGCACACAGAACATTG TCGTTGATGCCGGGCGCGTGCGGGTAGGAGACAGCCACATTTCGGTCCGGCCGTCGGGGGCAACGGCGTCGCTGGACGAC CTGCGGTCGATTCTGATCGCGAGTCAGGGGGGACGCCAAATCTTCCTGGAGGACATCGCCACGGTGCGGCGCGGCTACGC CGCCCCGCCCCGGGCCCTCATGCGGTACGACGGCGAGCCGGCAATCGGCCTCGGCGTATCGACCGTCGACGGGGGCAACG TCGTTACGATGGGACGGGCCGTGAAGGCCCGCCTCGATGAATTGAAGGCCGATCGCCCCGTGGGCATCGAGTACAACTAC ATCAACTTCCAGGCCGAGGACGTGAGCGAGGCGGTGAGTGGCTTTGTCTGGAACCTGGTCACCGCCATCGCGATCGTGAT CGTCGTGCTGCTGCTGGCGATGGGGTGGCGCAGCGGGCTCCTCATGGGGTTTGTGCTGGCGGTGACCGTGCTCGGCACGT TTATCCTGATGTACGCGACGGACGTGGTGCTGCAGCGGATCTCGCTGGGCGCGCTCATCATCGCGCTCGGGATGCTCGTC GACAACGCCGTGGTGATCGTGGACGGCATCCTGACGCGCCTCAAGGAGGGGCGGGAGCGGGTGGAGGCCGCGTCGGAGAT TGTGGAGCAGACGAAGTGGCCGCTCTTCGGGGCCACGGCCGTGGCCATCCTGGGCTTCGCCGCCATCGGGACCTCCTCCG ACAGCAGCGGGGAGTTTTTGGGGTCGTTGTTCCTCGTGATCCTCTACTCGCTGTCTCTGAGCTGGGTGCTCTCCGTTACG CTCGCGCCGCTCCTGGGGGTTGACTTTCTGAAGAAGCCCGACCCGGACGAGGCGGTGGAGAGCGCCCACGACGGGCCGGT CTACACTGTGTACCGGCGCCTGCTTCAGGGCGCGATCAACTACCGGTGGGTGACGGTGGCGGTCATCACGGTGCTCATGG GGCTGTCGATCTGGGGGAGCGGGTTCGTCAAGCAAAGCTTCTTTCCCGACTCCACGCGGCCGCAGTTTCTCGTGGACGTG TGGATGCCCCAGGGCACGCACATTCGGGACACTGAGGATGCCGTCAAGGAGGCGGAGCAGTACGTGCAGGGCCTCGACGC CGTCACCCACGTCAGTTCGGTGGTGGGGCAGGGGGCGCTCCGGTTCGTGCTGCCGTACAGCCCGGAGCGGCCCAACTCGT CCTACGCCCAGCTGATCGTGGACGTCGACGACTGGCGGACGATTTCCAGTCTCAAAGACTCGGTGGACGCCCGCCTCTCC GCGATGCTGCCGCGGGCCAACGTGTACGCGTTTCCGTTTGTCTTCGGGCCCGGGGGCGGCACCGGGCGCATTCAGGCGCG CATCAGCGGCCCCAACCCCGACTCGCTGCGGGCCATCGCCCAGCGCGTGGAGGGCATCTTTCGGGCGCACGACAACACCA AGGCCGTCCGCAACGACTGGCGCAACCGGGTGGAGGTCACCCGCCCCCAGGTCGCCGAGGACGCGGCGAGTGCCCTTGGG GTGACGCGCCCCGACGTGGCCCGCGCCGTTCAGCGGACCTTTGAGGGCACCCGCATGGGGGTGTACCGAAGAGGGGAGGA CCTGCTGCCCATCATGATGCGGGCCCCGTCCGAGGAGCGGGCCCGCGCCAGCAACATGAAAAACGCGCAGGTGTGGAGTC CCGTGGCGGGCGCGTACGTCCCGATCCGGCAGGTCGTCTCCGGGTTCGAGACCGGCTTCGAGGACGGCATTGTGTGGCGG TACAAGCGCGCCCCGACGGTGAGCGTGTACGCCGACCCCATCTCGGGGACGGCGACCTCGGTCTTCCAGCAGGTGCGCCC GACGGTGGAGAAGCTCTCGCTTCCGCGAGGGTACGACATCGAATGGGGCGGCCAGTACGAGAACTCGAACGAGGCCAATG CCTCGCTCTTCTCGGCGGTCCCGATTTTCTTCGTGCTGATGGTGCTGATCACGGTGGCACTCTTCAACGCGCTCCGCCAG CCGCTCATCATCTGGCTGACCGTGCCCCTGGCCCTGATCGGCGTGGTGGCGGGCCTGCTCGCCACGGGGGCGGCCTTCGG GTTTACGGCCCTGCTGGGCTTCCTGAGCCTGTCGGGCCTGCTCATCAAGAATGCCGTCGTCGTGATCGACGAGATCGAGA TCTGGAAGCAGGACGAATCGCTCTACCAGGCCATCGTGGGCGCGAGCGTCGTCCGGCTGCGCCCGGTCATGATGGCGTCG ATTACGACGGCCCTGGGCATGATTCCGCTCTTTACCGACGCGTTCTTCGTGGCCATGGCGGTGACCATCACGTCCGGGCT GCTCTTCGCCACGGTGCTCACAATGATCGTGGTACCGGTCCTCTACGCCATCCTCTTTGGCGTCGAGCGCCTCCCGTATT CGGAACGCTAG Protein sequence : MDIAKAAIENRTLTYVTTLLVVVGGVIAFLNLGRLEDPEFTIKRALVVTQYPGATAHEVEAEVSDPIEEAVQAMGKVKEI KSRSSRGRSTLEVEMKSDVIGDAVTQAFDDLRDKVNDAQGRLPPGAGPSVVEDDFGDVYGIFMAITGEGYSKQELKDHAE ALKRELVQVQGVAKVRLFADRQETIYVEPNRDRLSNLGISVDRIAGRLRTQNIVVDAGRVRVGDSHISVRPSGATASLDD LRSILIASQGGRQIFLEDIATVRRGYAAPPRALMRYDGEPAIGLGVSTVDGGNVVTMGRAVKARLDELKADRPVGIEYNY INFQAEDVSEAVSGFVWNLVTAIAIVIVVLLLAMGWRSGLLMGFVLAVTVLGTFILMYATDVVLQRISLGALIIALGMLV DNAVVIVDGILTRLKEGRERVEAASEIVEQTKWPLFGATAVAILGFAAIGTSSDSSGEFLGSLFLVILYSLSLSWVLSVT LAPLLGVDFLKKPDPDEAVESAHDGPVYTVYRRLLQGAINYRWVTVAVITVLMGLSIWGSGFVKQSFFPDSTRPQFLVDV WMPQGTHIRDTEDAVKEAEQYVQGLDAVTHVSSVVGQGALRFVLPYSPERPNSSYAQLIVDVDDWRTISSLKDSVDARLS AMLPRANVYAFPFVFGPGGGTGRIQARISGPNPDSLRAIAQRVEGIFRAHDNTKAVRNDWRNRVEVTRPQVAEDAASALG VTRPDVARAVQRTFEGTRMGVYRRGEDLLPIMMRAPSEERARASNMKNAQVWSPVAGAYVPIRQVVSGFETGFEDGIVWR YKRAPTVSVYADPISGTATSVFQQVRPTVEKLSLPRGYDIEWGGQYENSNEANASLFSAVPIFFVLMVLITVALFNALRQ PLIIWLTVPLALIGVVAGLLATGAAFGFTALLGFLSLSGLLIKNAVVVIDEIEIWKQDESLYQAIVGASVVRLRPVMMAS ITTALGMIPLFTDAFFVAMAVTITSGLLFATVLTMIVVPVLYAILFGVERLPYSER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SRU_0085 | YP_444238.1 | AcrB/AcrD/AcrF family transporter | BAC0428 | Protein | 2e-178 | 47 |
| SRU_0085 | YP_444238.1 | AcrB/AcrD/AcrF family transporter | BAC0519 | Protein | 0.0 | 47 |
| SRU_0085 | YP_444238.1 | AcrB/AcrD/AcrF family transporter | BAC0425 | Protein | 0.0 | 46 |
| SRU_0085 | YP_444238.1 | AcrB/AcrD/AcrF family transporter | BAC0526 | Protein | 1e-179 | 44 |
