Gene Information

Name : SRU_2830 (SRU_2830)
Accession : YP_446921.1
Strain : Salinibacter ruber DSM 13855
Genome accession: NC_007677
Putative virulence/resistance : Virulence
Product : response regulator receiver domain-containing protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3496425 - 3497168 bp
Length : 744 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGAGTGACGCCCCCCATCTTTTGCTTGTCGAGGACGAGCCCGACGTCGCCTCGTTCGTGCAGCAGGGGCTCAACGAAGA
GGGGTACGAGGTGAGCTGGGTCGAGGCCGGCCGGCGTGGGCTCGACTACGCCCGGCAGGGCGGCATCGACCTCGTGCTGC
TGGACATCCGTCTCCCCGATCTGTCCGGGCTGGAGGTGTGCGAGCGCCTGCGCCTGCACCGCCCCGAGCTGCCGATCCTG
ATGCTCACCGCCCTCGACGCCGTGGAGGACCGGGTGCGGGGCCTCCGGGCCGGGGCGGACGACTACCTCCCCAAGCCGTT
TGCCTTCGACGAGCTTCTGGCGCGCATCGAGGCCCTCCTGCGCCGCGTGGACCGGCCCTCGGAGCCGGGGCGGGTGGAGG
ACGGGCCGCTCGTGCTCGACCCGGCGGCCCGCACCTGCACCTTCGACGGCGAAGAAGTCGACCTTACGCCCACCGAGTTC
GACCTGTTGGCCTTCCTCATGGCCCGCCACGGCCAGGCGTTGAGCCGCGACACGATCCACCAGGAGGTGTGGGGGCATGA
TTTCGATCGCGGGACGAACCTGATCGACGTGTACGTGAACTACGTCCGCCGCAAGCTCGACGAGGTTGGCTGCGAGGCGC
CCATTGAAACCGTACGGGGCATCGGCTACCGGTACACCGCCTGCTCAGAGGCAGACGCCTCCGCCGACGACCGCTCCTCC
CCCACCGATTCCGCGAGCTCGTGA

Protein sequence : 
MSDAPHLLLVEDEPDVASFVQQGLNEEGYEVSWVEAGRRGLDYARQGGIDLVLLDIRLPDLSGLEVCERLRLHRPELPIL
MLTALDAVEDRVRGLRAGADDYLPKPFAFDELLARIEALLRRVDRPSEPGRVEDGPLVLDPAARTCTFDGEEVDLTPTEF
DLLAFLMARHGQALSRDTIHQEVWGHDFDRGTNLIDVYVNYVRRKLDEVGCEAPIETVRGIGYRYTACSEADASADDRSS
PTDSASS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-28 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-27 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein BAC0125 Protein 1e-31 45
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein BAC0308 Protein 1e-29 44
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein BAC0083 Protein 1e-31 44
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein BAC0111 Protein 2e-33 44
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein HE999704.1.gene1528. Protein 8e-34 43
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein BAC0197 Protein 1e-31 43
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein BAC0638 Protein 5e-26 43
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein BAC0347 Protein 2e-28 41
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein CP001918.1.gene5135. Protein 1e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein VFG1390 Protein 1e-32 45
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein VFG0596 Protein 3e-28 44
SRU_2830 YP_446921.1 response regulator receiver domain-containing protein VFG1389 Protein 4e-28 41