Gene Information

Name : recG (SRU_0269)
Accession : YP_444415.1
Strain : Salinibacter ruber DSM 13855
Genome accession: NC_007677
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 361774 - 363876 bp
Length : 2103 bp
Strand : -
Note : identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM PF04851; match to protein family HMM TIGR00643

DNA sequence :
ATGAGCGAGGACTTTCTTCAACAGGACGTCCGCTACGTAAAGGGAGTGGGGGAGAAGCGCGCCGACGTGTGGGCGGAGCA
GCATGGCGTGCGCACGGTGCACGACCTGCTGCGCTTCTACCCCCGCCGCTACCTCGACCGCACGACCGTGACCCCGGTGC
GCCAGCTGCAGGAGGGCCCCGACTCGGTCACGGTCGTCGGGACCGTCCGCTCCGTCAACGTGGTGCCCGGCAACAACCAG
AAGCGGCTCGAAATCATCCTGGAGGGGGAGCAGGGCGGGCGCATGAAGGGCACCTGGTTTCAGGGGGTCTGGTGGGTGCG
GAAGGCGTTCGACGAGGGCGACCGCGTGGCCTTCCACGGAACGGTGGAGAAGTACGGCCGCTGGCACTCAATGACCCACC
CGGACTTCGACCGCCTCAACGACGAGGGCCCCCTCCTCGACACGGGCCGCATCGTGCCGCTCTATCCGGGCGGGGAGGCC
ATGAGCAACGTCGGCCTCACGAGCCGGACCGTCCGCCGCGTCCTGTACGACCTGTTCAAGGAGCACGGCCTGAAGCTCAC
GGAGACGATGCCCGACTGGATCATGGACGGGTACGACCTCATGGAGGGCCGCGTGGCGCTGCGGGCCATTCACTTCCCGA
AGACCCAGCAGGAGCTCTCGCGGGCCCGGCGGCGGCTCAAGTTCGAGGAGCTCTTCTTCATCCAGCTCCTGCTGGCCCAG
ATGCACGAGCAACAGGAGGAGGTGGCGGGGCCCGCCTTCGACGACCCTGGCGCATACACCCGTGAGTTTGTGCGGGAGGT
GCTCCCCTTCGAGCTCACGGGCGCCCAGACCCGGGCCCTGCGCGAGATCATCGGCGACGTACAGACGGGCACGCAGATGA
ACCGCCTCCTGCAGGGGGACGTGGGCAGCGGCAAGACGGTCGTCGCCGTGGCCGCCATGATGCACGCCTACGACAGCGGC
TACCAGAGCGCCTTCATGGCCCCCACCGAGATCCTCGCCGAGCAGCACCACGCCAATCTGCAGGACTACCTCCAGCCGCT
GGGGCTGGAGCCCCGCCTGCTGATCGGGAGCCAGACCAAGGCAGAACGGGAGGCGGCGCTCCAGGCCGTCCGCAGCGGCG
CGAGCCCGGTCGCCGTGGGCACGCACGCCCTCATCCAGGACGAGGTCGCGTTCGACCGTCTCGGCCTCGCGGTGGTCGAC
GAGCAGCACCGCTTCGGGGTGGCCCAGCGGGCCGAGATGTTCGAGAAGGGCGAGCGGCCCCACATGCTCCTCATGACGGC
CACGCCCATTCCCCGCTCCCTCGCCCTCACGCTCTACGGCGACCTCGACGTGTCGAAGATTGACGAGATGCCGCCGGGCC
GCAAGCCGGTCGAGACGCGCCTGCGGGCCGAAAAGCGGCGGGGGGAGGTGTACGCGTTTCTAAACGACCGGCTGGAGCAG
GGCGAGCAGGCGTTCGTGGTGTACCCGCTCGTGGAGGAGAGCGAGAAGATGGACCTGAAGGACGCGGAGAGCGGGGCCCA
GGAGCTGCAGGAGAAATTCCCGGACTACACGGTCGGGCTGGTGCACGGCCAGCTCTCGGCCGACGACAAGGACGCGACGA
TGCGCCGGTTCAAGGAGGGGGACATCGACCTCCTCGTGGCCACGACCGTGATCGAGGTGGGGGTCGACGTGCCGAACGCG
ACGGTGATGCTCGTGGAGCACGCCGAGCGGTTCGGGCTCAGCCAGCTCCACCAGCTGCGCGGCCGGGTGGGGCGGTCCGA
CCAGCAGAGCTACTGCGTCCTCATGGCCAGCTACAAACGAAGTCAGGAGGCGAAGCAGCGCCTGGAGGCGATGGCCCGCA
CGAACGACGGCTTCGAGATCAGCGAGACGGACCTCCAGATCCGCGGCGCCGGGGACTTCTTTGGCACCCGCCAGAGCGGC
ATGCCCGACCTCAAGATTGCCGACCTCACCGAGGACGATGAAATTCTGGAGGTCGCCCGCGAGGCCGCCTTCGCCCTCAT
CGAGAAGGACCCGCACCTGCGGGCCGACGAGCACGAGCGGCTCCGCCGCCGCTATCAGGAGGACTACGCTGAGCACGGCC
TCGGCTTCGCTCGGGTGGGATAA

Protein sequence :
MSEDFLQQDVRYVKGVGEKRADVWAEQHGVRTVHDLLRFYPRRYLDRTTVTPVRQLQEGPDSVTVVGTVRSVNVVPGNNQ
KRLEIILEGEQGGRMKGTWFQGVWWVRKAFDEGDRVAFHGTVEKYGRWHSMTHPDFDRLNDEGPLLDTGRIVPLYPGGEA
MSNVGLTSRTVRRVLYDLFKEHGLKLTETMPDWIMDGYDLMEGRVALRAIHFPKTQQELSRARRRLKFEELFFIQLLLAQ
MHEQQEEVAGPAFDDPGAYTREFVREVLPFELTGAQTRALREIIGDVQTGTQMNRLLQGDVGSGKTVVAVAAMMHAYDSG
YQSAFMAPTEILAEQHHANLQDYLQPLGLEPRLLIGSQTKAEREAALQAVRSGASPVAVGTHALIQDEVAFDRLGLAVVD
EQHRFGVAQRAEMFEKGERPHMLLMTATPIPRSLALTLYGDLDVSKIDEMPPGRKPVETRLRAEKRRGEVYAFLNDRLEQ
GEQAFVVYPLVEESEKMDLKDAESGAQELQEKFPDYTVGLVHGQLSADDKDATMRRFKEGDIDLLVATTVIEVGVDVPNA
TVMLVEHAERFGLSQLHQLRGRVGRSDQQSYCVLMASYKRSQEAKQRLEAMARTNDGFEISETDLQIRGAGDFFGTRQSG
MPDLKIADLTEDDEILEVAREAAFALIEKDPHLRADEHERLRRRYQEDYAEHGLGFARVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-100 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
recG YP_444415.1 ATP-dependent DNA helicase RecG BAC0356 Protein 3e-93 41