Name : recG (SRU_0269) Accession : YP_444415.1 Strain : Salinibacter ruber DSM 13855 Genome accession: NC_007677 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 361774 - 363876 bp Length : 2103 bp Strand : - Note : identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM PF04851; match to protein family HMM TIGR00643 DNA sequence : ATGAGCGAGGACTTTCTTCAACAGGACGTCCGCTACGTAAAGGGAGTGGGGGAGAAGCGCGCCGACGTGTGGGCGGAGCA GCATGGCGTGCGCACGGTGCACGACCTGCTGCGCTTCTACCCCCGCCGCTACCTCGACCGCACGACCGTGACCCCGGTGC GCCAGCTGCAGGAGGGCCCCGACTCGGTCACGGTCGTCGGGACCGTCCGCTCCGTCAACGTGGTGCCCGGCAACAACCAG AAGCGGCTCGAAATCATCCTGGAGGGGGAGCAGGGCGGGCGCATGAAGGGCACCTGGTTTCAGGGGGTCTGGTGGGTGCG GAAGGCGTTCGACGAGGGCGACCGCGTGGCCTTCCACGGAACGGTGGAGAAGTACGGCCGCTGGCACTCAATGACCCACC CGGACTTCGACCGCCTCAACGACGAGGGCCCCCTCCTCGACACGGGCCGCATCGTGCCGCTCTATCCGGGCGGGGAGGCC ATGAGCAACGTCGGCCTCACGAGCCGGACCGTCCGCCGCGTCCTGTACGACCTGTTCAAGGAGCACGGCCTGAAGCTCAC GGAGACGATGCCCGACTGGATCATGGACGGGTACGACCTCATGGAGGGCCGCGTGGCGCTGCGGGCCATTCACTTCCCGA AGACCCAGCAGGAGCTCTCGCGGGCCCGGCGGCGGCTCAAGTTCGAGGAGCTCTTCTTCATCCAGCTCCTGCTGGCCCAG ATGCACGAGCAACAGGAGGAGGTGGCGGGGCCCGCCTTCGACGACCCTGGCGCATACACCCGTGAGTTTGTGCGGGAGGT GCTCCCCTTCGAGCTCACGGGCGCCCAGACCCGGGCCCTGCGCGAGATCATCGGCGACGTACAGACGGGCACGCAGATGA ACCGCCTCCTGCAGGGGGACGTGGGCAGCGGCAAGACGGTCGTCGCCGTGGCCGCCATGATGCACGCCTACGACAGCGGC TACCAGAGCGCCTTCATGGCCCCCACCGAGATCCTCGCCGAGCAGCACCACGCCAATCTGCAGGACTACCTCCAGCCGCT GGGGCTGGAGCCCCGCCTGCTGATCGGGAGCCAGACCAAGGCAGAACGGGAGGCGGCGCTCCAGGCCGTCCGCAGCGGCG CGAGCCCGGTCGCCGTGGGCACGCACGCCCTCATCCAGGACGAGGTCGCGTTCGACCGTCTCGGCCTCGCGGTGGTCGAC GAGCAGCACCGCTTCGGGGTGGCCCAGCGGGCCGAGATGTTCGAGAAGGGCGAGCGGCCCCACATGCTCCTCATGACGGC CACGCCCATTCCCCGCTCCCTCGCCCTCACGCTCTACGGCGACCTCGACGTGTCGAAGATTGACGAGATGCCGCCGGGCC GCAAGCCGGTCGAGACGCGCCTGCGGGCCGAAAAGCGGCGGGGGGAGGTGTACGCGTTTCTAAACGACCGGCTGGAGCAG GGCGAGCAGGCGTTCGTGGTGTACCCGCTCGTGGAGGAGAGCGAGAAGATGGACCTGAAGGACGCGGAGAGCGGGGCCCA GGAGCTGCAGGAGAAATTCCCGGACTACACGGTCGGGCTGGTGCACGGCCAGCTCTCGGCCGACGACAAGGACGCGACGA TGCGCCGGTTCAAGGAGGGGGACATCGACCTCCTCGTGGCCACGACCGTGATCGAGGTGGGGGTCGACGTGCCGAACGCG ACGGTGATGCTCGTGGAGCACGCCGAGCGGTTCGGGCTCAGCCAGCTCCACCAGCTGCGCGGCCGGGTGGGGCGGTCCGA CCAGCAGAGCTACTGCGTCCTCATGGCCAGCTACAAACGAAGTCAGGAGGCGAAGCAGCGCCTGGAGGCGATGGCCCGCA CGAACGACGGCTTCGAGATCAGCGAGACGGACCTCCAGATCCGCGGCGCCGGGGACTTCTTTGGCACCCGCCAGAGCGGC ATGCCCGACCTCAAGATTGCCGACCTCACCGAGGACGATGAAATTCTGGAGGTCGCCCGCGAGGCCGCCTTCGCCCTCAT CGAGAAGGACCCGCACCTGCGGGCCGACGAGCACGAGCGGCTCCGCCGCCGCTATCAGGAGGACTACGCTGAGCACGGCC TCGGCTTCGCTCGGGTGGGATAA Protein sequence : MSEDFLQQDVRYVKGVGEKRADVWAEQHGVRTVHDLLRFYPRRYLDRTTVTPVRQLQEGPDSVTVVGTVRSVNVVPGNNQ KRLEIILEGEQGGRMKGTWFQGVWWVRKAFDEGDRVAFHGTVEKYGRWHSMTHPDFDRLNDEGPLLDTGRIVPLYPGGEA MSNVGLTSRTVRRVLYDLFKEHGLKLTETMPDWIMDGYDLMEGRVALRAIHFPKTQQELSRARRRLKFEELFFIQLLLAQ MHEQQEEVAGPAFDDPGAYTREFVREVLPFELTGAQTRALREIIGDVQTGTQMNRLLQGDVGSGKTVVAVAAMMHAYDSG YQSAFMAPTEILAEQHHANLQDYLQPLGLEPRLLIGSQTKAEREAALQAVRSGASPVAVGTHALIQDEVAFDRLGLAVVD EQHRFGVAQRAEMFEKGERPHMLLMTATPIPRSLALTLYGDLDVSKIDEMPPGRKPVETRLRAEKRRGEVYAFLNDRLEQ GEQAFVVYPLVEESEKMDLKDAESGAQELQEKFPDYTVGLVHGQLSADDKDATMRRFKEGDIDLLVATTVIEVGVDVPNA TVMLVEHAERFGLSQLHQLRGRVGRSDQQSYCVLMASYKRSQEAKQRLEAMARTNDGFEISETDLQIRGAGDFFGTRQSG MPDLKIADLTEDDEILEVAREAAFALIEKDPHLRADEHERLRRRYQEDYAEHGLGFARVG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-100 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
recG | YP_444415.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 3e-93 | 41 |