Gene Information

Name : serS (SRU_1855)
Accession : YP_445967.1
Strain : Salinibacter ruber DSM 13855
Genome accession: NC_007677
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : -
Position : 2291084 - 2292370 bp
Length : 1287 bp
Strand : +
Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414

DNA sequence :
ATGCTCGACCTCGACACCGTCCGCAACGATCCCCGCCGCGTCAAGGAGGCCCTCCGGGCCAAAGGCATCGGCTCGCCCGA
CCTCGTCGACACGCTCCTCGAGATCGACGAGACGCGCCGGTCTGCCATCACGGAGCTGCAAGACGTGCAGTCTCGTCAGA
ACGAGCTCTCGCAGCAAATCGGGGCCTTGAAGCGAGAGGGCAAGGACGAGGAGGCGGAGGCGATTATTGAAAAGACCGGC
CGGATGAAGGAGAAGATCAATCGCCTGAAGGAGGAGGTGCAGGAGGCGGAGGCCCGGCAGGAGGAGCTCGTGCTGGAGCT
TCCCAACATTCCGCACCCGAGCGTTCCGGTCGGGGCGGACGAGGACGACAACGAGGTCGAGGCGACGGTCGGCGAGATGC
CCGCGTTCGACTTCGACCCGGCGCCGCACTGGGAGCTGGCCGACCGGCATAATCTCGTGGACCTGGAGCGGGGCGCCAAG
GTGGCGGGAAGCGGGTTCCCGTTTTACCTCGGCAAGGGGGCTCGGCTCCAGCGGGCCCTCCTCAACTTCTTCCTGGACCG
CGCCCGGGAGCGCGGATACACCGAAATGCAGGCCCCGCTCTTCGTCAACCCGGAGAGCGCAAAGGGCACCGGTCAGATTC
CGGACAAGGACGCTCTGATGTACGAGATTCCGCGCGACGACTTTTACCCCATCCCCACCGCCGAGGTGCCCGTCACCAAC
TTTCACCGGGACGAGATCCTCGCGGCCGACGACCTGCCCCGTCGGTACTGCACCTACTCGCCCTGCTGGCGGCGCGAGGC
CGGCAGCTACGGCTCGGACGTGCGCGGCCTCAACCGCCTGCACCAGTTCGACAAGGTCGAGCTCGTGCGGATCGTGCCCC
CCGACGAGAGCTACCGCGCGCTCGACGCGCTTCTGGAGGACGCCGAAAGCGCCCTCGACGCCCTCGACCTTCCCTACCGC
CGCCTCCTCATGTGCACCGGCGACATGGGCTTCACGCAGGCCAAGGTATACGACCTGGAGGTGTGGAGCGCGGCGCAAGA
ACGCTGGCTGGAAGTGTCCTCCGTCTCCAACTTCGAGGCCTTTCAGGCCCGCCGCGCACAGATCCGCTACCGGCTCGAGC
CGGAGGCCAAGCCCGAACTCGTCCACACCCTCAACGGAAGCGGCCTCGCCTTTCCCCGCATCGTAGCGGCCCTCCTCGAA
AACAACCAGCAGCCCGACGGCTCCATCGAACTGCCGGAGGCGCTCCACCCCTACACCGGGTTTGCCCGAATCGGGGCAGA
AGCGTGA

Protein sequence :
MLDLDTVRNDPRRVKEALRAKGIGSPDLVDTLLEIDETRRSAITELQDVQSRQNELSQQIGALKREGKDEEAEAIIEKTG
RMKEKINRLKEEVQEAEARQEELVLELPNIPHPSVPVGADEDDNEVEATVGEMPAFDFDPAPHWELADRHNLVDLERGAK
VAGSGFPFYLGKGARLQRALLNFFLDRARERGYTEMQAPLFVNPESAKGTGQIPDKDALMYEIPRDDFYPIPTAEVPVTN
FHRDEILAADDLPRRYCTYSPCWRREAGSYGSDVRGLNRLHQFDKVELVRIVPPDESYRALDALLEDAESALDALDLPYR
RLLMCTGDMGFTQAKVYDLEVWSAAQERWLEVSSVSNFEAFQARRAQIRYRLEPEAKPELVHTLNGSGLAFPRIVAALLE
NNQQPDGSIELPEALHPYTGFARIGAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 3e-75 48