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Name : serS (SRU_1855) Accession : YP_445967.1 Strain : Salinibacter ruber DSM 13855 Genome accession: NC_007677 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2291084 - 2292370 bp Length : 1287 bp Strand : + Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGCTCGACCTCGACACCGTCCGCAACGATCCCCGCCGCGTCAAGGAGGCCCTCCGGGCCAAAGGCATCGGCTCGCCCGA CCTCGTCGACACGCTCCTCGAGATCGACGAGACGCGCCGGTCTGCCATCACGGAGCTGCAAGACGTGCAGTCTCGTCAGA ACGAGCTCTCGCAGCAAATCGGGGCCTTGAAGCGAGAGGGCAAGGACGAGGAGGCGGAGGCGATTATTGAAAAGACCGGC CGGATGAAGGAGAAGATCAATCGCCTGAAGGAGGAGGTGCAGGAGGCGGAGGCCCGGCAGGAGGAGCTCGTGCTGGAGCT TCCCAACATTCCGCACCCGAGCGTTCCGGTCGGGGCGGACGAGGACGACAACGAGGTCGAGGCGACGGTCGGCGAGATGC CCGCGTTCGACTTCGACCCGGCGCCGCACTGGGAGCTGGCCGACCGGCATAATCTCGTGGACCTGGAGCGGGGCGCCAAG GTGGCGGGAAGCGGGTTCCCGTTTTACCTCGGCAAGGGGGCTCGGCTCCAGCGGGCCCTCCTCAACTTCTTCCTGGACCG CGCCCGGGAGCGCGGATACACCGAAATGCAGGCCCCGCTCTTCGTCAACCCGGAGAGCGCAAAGGGCACCGGTCAGATTC CGGACAAGGACGCTCTGATGTACGAGATTCCGCGCGACGACTTTTACCCCATCCCCACCGCCGAGGTGCCCGTCACCAAC TTTCACCGGGACGAGATCCTCGCGGCCGACGACCTGCCCCGTCGGTACTGCACCTACTCGCCCTGCTGGCGGCGCGAGGC CGGCAGCTACGGCTCGGACGTGCGCGGCCTCAACCGCCTGCACCAGTTCGACAAGGTCGAGCTCGTGCGGATCGTGCCCC CCGACGAGAGCTACCGCGCGCTCGACGCGCTTCTGGAGGACGCCGAAAGCGCCCTCGACGCCCTCGACCTTCCCTACCGC CGCCTCCTCATGTGCACCGGCGACATGGGCTTCACGCAGGCCAAGGTATACGACCTGGAGGTGTGGAGCGCGGCGCAAGA ACGCTGGCTGGAAGTGTCCTCCGTCTCCAACTTCGAGGCCTTTCAGGCCCGCCGCGCACAGATCCGCTACCGGCTCGAGC CGGAGGCCAAGCCCGAACTCGTCCACACCCTCAACGGAAGCGGCCTCGCCTTTCCCCGCATCGTAGCGGCCCTCCTCGAA AACAACCAGCAGCCCGACGGCTCCATCGAACTGCCGGAGGCGCTCCACCCCTACACCGGGTTTGCCCGAATCGGGGCAGA AGCGTGA Protein sequence : MLDLDTVRNDPRRVKEALRAKGIGSPDLVDTLLEIDETRRSAITELQDVQSRQNELSQQIGALKREGKDEEAEAIIEKTG RMKEKINRLKEEVQEAEARQEELVLELPNIPHPSVPVGADEDDNEVEATVGEMPAFDFDPAPHWELADRHNLVDLERGAK VAGSGFPFYLGKGARLQRALLNFFLDRARERGYTEMQAPLFVNPESAKGTGQIPDKDALMYEIPRDDFYPIPTAEVPVTN FHRDEILAADDLPRRYCTYSPCWRREAGSYGSDVRGLNRLHQFDKVELVRIVPPDESYRALDALLEDAESALDALDLPYR RLLMCTGDMGFTQAKVYDLEVWSAAQERWLEVSSVSNFEAFQARRAQIRYRLEPEAKPELVHTLNGSGLAFPRIVAALLE NNQQPDGSIELPEALHPYTGFARIGAEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-75 | 48 |
