Gene Information

Name : SRU_1331 (SRU_1331)
Accession : YP_445455.1
Strain : Salinibacter ruber DSM 13855
Genome accession: NC_007677
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1676036 - 1676884 bp
Length : 849 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
TTGGCGGTTAGGCGCGAAGATTCTGGAGAGAGGCCCTCCCCTCGGAACGGCCCCCTCCATCCTCGGCGTTGGGTTTTTGG
CCCTGGGTCTCATCCCTGCCGCCAAGCCTCATTCCGACCGCCGCCCGCCCGTATGCCCGACGCCTCGTCGCCCCTCGTCC
AGCTCGACGCCCTCACGAAGACCTACCGTGAGGGGGAGCAGGACCGCACGGTGCTTCAGGAGGTCTCGTTGCGTCTGGAA
CGGGGCGACTTCTCGGTGCTCATGGGGCGGAGCGGGGCCGGGAAGAGCACGCTCCTCAACCTGATCAGCGGCATCGATCA
GCCCACGTCCGGCCGCGTGCAGATTGGCGACACCGACCTCACCGGCAAGTCCGAGACAGAACGCACACGCTTTCGCCGCT
CTCACGTGGGGTTTGTGTTTCAGTCGTTCAACCTGATCTCGACCCTCACGGTCGGGGAGAACGTGCGGCTGCCCCTCGAG
CTGGCCGGCGAGCCCCCCCGGGCCACGAAGGACCGGGCCCGGGCGATGCTGGACCGGGTCGGGCTGGCCGACCGGGCCGA
CCAGTTCCCCGACCGCCTCTCCGGCGGGGAGCAGCAGCGGGTGGCCGTCGCCCGGGCCCTGGCCCACGAGCCCCTCCTCG
TTCTCGCCGACGAACCGACGGGCAACCTGGACTACGACACGGGACAGGCGGTGCTCACCCTCCTCAGTGACCTCGTGGTC
GATACCGATACCACCCTCCTCGTGGCCACGCACGACCCGGAGGTGGTTCCCCGGGCCGACCGGGTCCTGCACCTCCACGG
CGGCTCCCTGCACGAAGAGGTGCCCGAATACATCACGTCGGGGACGTAG

Protein sequence :
MAVRREDSGERPSPRNGPLHPRRWVFGPGSHPCRQASFRPPPARMPDASSPLVQLDALTKTYREGEQDRTVLQEVSLRLE
RGDFSVLMGRSGAGKSTLLNLISGIDQPTSGRVQIGDTDLTGKSETERTRFRRSHVGFVFQSFNLISTLTVGENVRLPLE
LAGEPPRATKDRARAMLDRVGLADRADQFPDRLSGGEQQRVAVARALAHEPLLVLADEPTGNLDYDTGQAVLTLLSDLVV
DTDTTLLVATHDPEVVPRADRVLHLHGGSLHEEVPEYITSGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SRU_1331 YP_445455.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-31 44
SRU_1331 YP_445455.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-36 43
SRU_1331 YP_445455.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 9e-34 41