Gene Information

Name : SRU_1228 (SRU_1228)
Accession : YP_445353.1
Strain : Salinibacter ruber DSM 13855
Genome accession: NC_007677
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase, mitochondrial
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1545153 - 1546742 bp
Length : 1590 bp
Strand : +
Note : identified by match to protein family HMM PF00171

DNA sequence :
ATGGCTGAACTAGAGGCCGCCCCCAACACCGCTCGCGAGCTGCTCTTCGGCGACGAATGGGAGTACGCCCCCGCCCCGCA
GTCCGCCGACCACGTGCGCCTGGACGACCGCTACGGGCCCTTCATCGACGGGGAATTCCGGGAAGTGGACGAGTACTTCC
CGTCGATCAACCCGGCCACGGAGGAGCCGCTCGCGGAGGTCGGCCTCGCCGACGAGGCCGTCGTCGACGAGGCCGTCGGG
GCCGCCCGGACGGCGTACGAGTCGCACTGGCGCGACCTGCCCGGAAAAGAGCGGGCGAAATACATCTATCGGATCGGGCG
GATGATCAAGGAAAAGTCCCGCGAGTTCGCGGTGCTGGAGTCGATGGACGGGGGCAAGCCGATCCGCGAGTCGCGCGACA
TGGACATCCCCCTGGTGGCGGCCCACTTCTTCCACTACGCCGGCTGGGCCGACAAGCTGGAGTACGCCCTGCCGGGCCCG
GGCCGGCCCCGCTCGCTGGGCGTGTGCGGCCAGATCATCCCCTGGAACTTTCCGCTCCTGATGGCGGCGTGGAAGCTGGC
CCCGGCCCTCGCTACGGGCAACACCGTCGTGCTGAAGCCCGCCGAGACGACGCCCCTCACGGCCCTCAAGCTCGCCGAGG
TGATTCAGGAGGCGGGCCTGCCGCCCGGCGTCGTCAACATCGTGCAGGGGGCCGGCGAGGTGGGCTCCGCCCTCGTGGAG
CACCCGGACGTCGACAAGATTGCGTTTACCGGCTCCACCGGGGTCGGCAAGCACATCCAGAAGCAGCTTGCCGGGACGAA
GAAGCGCCTCACGCTGGAGCTGGGGGGGAAGGGGGCCAACATCGTCTTCGAGGACGCGCCCATCGACCAGGCCGTGGAGG
GCATCGTGGACGGCATCTACTTCAACCAGGGGCACGTCTGCTGTGCGGGGTCGCGGCTGCTGGTCCAGGAGAGCGTGGCG
GAGGAGGTGACCCGGAAGCTGCGGGACCGCATCGCGACGCTCCGGGTGGGCGACCCGCTCGACAAGAACACCGACATCGG
GGCGATCAACTCGAAGCCACAGCTGGAGAAAATCCGCCGCCTCGTGGACGTCGGCGAGCGGGAGGGCGCCGACAAGTTCC
AGCCGGAGTGCAACCTGCCGGACGACGGCTTCTGGTTCCCGCCCACGTTCTTCACCAACGTGACGCAGTCCCACCGCATC
GCGCAGGAGGAGATTTTTGGTCCCGTCCTGTCGGTCACTACGTTCCGCACGCCCGAGGAGGCGGTCGAGCGCGCCAACAA
CACCGAGTACGGCCTCGCCTCTGGCATCTGGAGCGACAAGGGCTCGAAGCTCTTCTCGATCTCGCAGGCGCTGAAAAGCG
GCGTGGTCTGGGGCAATACCTACAACAAGTTCGACCCCGCCAGCCCCTTCGGCGGCTACAAGGAAAGCGGCTTCGGCCGC
GAGGGGGGCATGCACGGTCTTCTTCCGTACCTTGAACGTCCATCGCAGTCATGGCAGCCACAGACGCCCACGAACGGCTC
CCCGTCTACAAAACCCGCAAGCTCTACATCGGCGGGGGCTTCCCCCGAACCGAAAGCGGACGATACATAA

Protein sequence :
MAELEAAPNTARELLFGDEWEYAPAPQSADHVRLDDRYGPFIDGEFREVDEYFPSINPATEEPLAEVGLADEAVVDEAVG
AARTAYESHWRDLPGKERAKYIYRIGRMIKEKSREFAVLESMDGGKPIRESRDMDIPLVAAHFFHYAGWADKLEYALPGP
GRPRSLGVCGQIIPWNFPLLMAAWKLAPALATGNTVVLKPAETTPLTALKLAEVIQEAGLPPGVVNIVQGAGEVGSALVE
HPDVDKIAFTGSTGVGKHIQKQLAGTKKRLTLELGGKGANIVFEDAPIDQAVEGIVDGIYFNQGHVCCAGSRLLVQESVA
EEVTRKLRDRIATLRVGDPLDKNTDIGAINSKPQLEKIRRLVDVGEREGADKFQPECNLPDDGFWFPPTFFTNVTQSHRI
AQEEIFGPVLSVTTFRTPEEAVERANNTEYGLASGIWSDKGSKLFSISQALKSGVVWGNTYNKFDPASPFGGYKESGFGR
EGGMHGLLPYLERPSQSWQPQTPTNGSPSTKPASSTSAGASPEPKADDT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-67 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-65 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-59 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-69 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-69 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-69 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SRU_1228 YP_445353.1 aldehyde dehydrogenase, mitochondrial VFG0082 Protein 1e-67 43