Gene Information

Name : SRU_1224 (SRU_1224)
Accession : YP_445349.1
Strain : Salinibacter ruber DSM 13855
Genome accession: NC_007677
Putative virulence/resistance : Virulence
Product : hemin ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1540436 - 1541437 bp
Length : 1002 bp
Strand : -
Note : identified by match to protein family HMM PF01032

DNA sequence : 
TTGGGACTGTTGGCGGTCCTCATCGGCACGATCGGGGCGGCCGTGGCCGTGGGCAGTACGACGACGGCCTGGGCCGACGT
GTACCGGGTCCTCGCCCACCGCCTCTTCGGCCTCGGCCCGGCCCCGGACCCGACGGTTGACCGCATCGTGTGGCGCCTGC
GCCTCCCGCGGGCCGCTCTGGCCTGTGTGGTGGGCGGCGGGCTCTCCATCATCGGGGTGGCGATGCAGACGCTCGTGCGC
AACCCGCTCGCGGAGCCCTACATCTTGGGCATCTCCAGCGGCGCCTCGGCCGGGGCGTCGTTCTTCTACCTCGGCTTCCT
GCCGCCCCTGCTTAGCAAAGCCCTGACGATGCCCCTGGCCGCCTTCGTCGGGGGACTGGCCTCCATCACGATCGTGTATC
TCGTGGCCCGCGACGGCGTCCGCGTGTCGGTGGCCCGGCTGCTGCTGGCCGGGGTGGCGATGTCCGCCCTCATGGCCTCC
CTCACCTCGTTCGTCACCTTTTCCTCCCCGGAGCCGGACAAGCTGCGGGCGGTGCTCTTCTGGCTGCTCGGCTCGCTGAG
CGGGGCGCGGTGGGGGTTGCTGCCCATCCCGGCCGTCACGACGGCCCTCGGCCTCGGGGCCCTGCTGGTCCTCGCCCGCC
CGCTCGACGCCATGCTCGTCGGCGAGGAGCCGGCACGGAGCCTCGGGATGCCGGTCGAGGCCCTCAAGCGGGGCCTCATC
GTGCTGGCGACGCTGGTGACGGGCACGCTGGTGGCCGTCTCCGGGGCCATCGGATTCGTCGGCCTCATCGTGCCGCATGC
CGTCCGCCTGCTCGTGGGCGTGCCGCATCGGCGCCTGGTCCCCCTGAGCTTCGTCGCCGGGGCCATCTTCCTCTGCTGGG
CCGACCTCGCCGCCCGCACGGTCCTGCCGGGACAGGAGTTGCCCGTAGGCATCCTCACCGCCCTCTGTGGGGTGCCCTTT
TTCCTGGTGCTGCTCCGCCGCCGCGCCTACCACTTTGGGTAA

Protein sequence : 
MGLLAVLIGTIGAAVAVGSTTTAWADVYRVLAHRLFGLGPAPDPTVDRIVWRLRLPRAALACVVGGGLSIIGVAMQTLVR
NPLAEPYILGISSGASAGASFFYLGFLPPLLSKALTMPLAAFVGGLASITIVYLVARDGVRVSVARLLLAGVAMSALMAS
LTSFVTFSSPEPDKLRAVLFWLLGSLSGARWGLLPIPAVTTALGLGALLVLARPLDAMLVGEEPARSLGMPVEALKRGLI
VLATLVTGTLVAVSGAIGFVGLIVPHAVRLLVGVPHRRLVPLSFVAGAIFLCWADLAARTVLPGQELPVGILTALCGVPF
FLVLLRRRAYHFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1769 YP_005134303.1 ferrichrome transport system permease protein fhuB Virulence Not named Protein 2e-28 43
fecD AAL08452.1 FecD Virulence SRL Protein 6e-22 42
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-29 41
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-29 41
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 4e-29 41
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SRU_1224 YP_445349.1 hemin ABC transporter permease BAC0163 Protein 4e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SRU_1224 YP_445349.1 hemin ABC transporter permease VFG1043 Protein 3e-22 42