Gene Information

Name : SRU_1161 (SRU_1161)
Accession : YP_445287.1
Strain : Salinibacter ruber DSM 13855
Genome accession: NC_007677
Putative virulence/resistance : Unknown
Product : cystathionine beta-lyase MetC
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1461993 - 1463219 bp
Length : 1227 bp
Strand : -
Note : identified by match to protein family HMM PF01053; match to protein family HMM PF01212

DNA sequence :
ATGGACCTGGACCCGGAAACAACGCTCTCCCTCGCTGGGCAGGACCTCGACGACACGTTCAATAGCGTCGTGCCCCCCCT
CTACCAGTCGGCCATCTTCCAGTTTGAAGATGTCGGCGAGACGAAAGGGTACGACTACACCCGTAGCGGCAACCCGACGC
GGGCGGCCCTGGAGGACACGCTGGCCGACCTCGACGGCGGGGCCGGCGCCGTGGCGTGCGCCACCGGCATGGCCGCCGTG
TCGACCGTCACGTCGCTCTTCGACGCCGGTGCGCACCTGATCTGTGCGCACGACTGCTACGGGGGCACCGAGCGCCTCTT
TTCTTGTCTCGACGATCAGGACAAACTCTCCGTCTCCTACGAAGACCTTTCGGACCGCGACGCCCTTGCCGACGCCGTGC
GGCCCGAAACGACGGCCTTGTGGGTGGAAACGCCCTCCAACCCCCTTCTTCGCATCGTCGACCTGGAGGCCCTCTCCGAG
TTCGCCGACGCACACGATCTACTGCTTGTCGTCGACAACACCTTTCTTTCTCCCCTCCTGCAGCGGCCCATCGACTACGG
GGCCGACCTCGTGGTGTACTCGACGACGAAGTACCTGAACGGCCACTCCGACGTAGTGGGCGGCGCCATCATTGCCCGCA
CGGAGGCCCTCGCCGATCGGGTTGACTTTGCGGCCAATGCGCACGGCACCGTCGCCGCGCCGTTCGACAGCTGGCTCGTC
CTCCGCGGGGCCAAGACCCTACCGGTCCGCCTGCGCCAGCACGAAACCAATGCGCGAGCCCTCGCGCGCTCTCTGGACGA
GCACCCGGCCGTGCAGCGCGTCTGCTACCCGGGCCTCTACGACCATCCCGGCCACGAGATCGCACGCGCTCAGCAGAACG
GCTACGGCGGCATGGTCTCCTTCTTCGTCGACGACGAACAGGTGGACGTCGAAGCGCTGCTGCGCTCCACCGAGGTCTTT
GCCCTCGCCGAGTCGCTAGGGGGCGTCGAGTCGCTGATCGAGCACCCGGCCACCATGAGCCACGCGTCGATGGCCCCCGA
GCAGCGGGAGGCGGCGGGCATCACCAACGGCCTCATCCGTCTCTCCGTCGGCATCGAGTCGACCGACGACCTCCGGGCAG
ACCTGAGTCAGGCCCTGACGGCGGCGGGCGCCGAGGCGGCAGCGAGCGGGCACGACACGCCCGTTTCCGCAGAGGCCCAA
GCCCCGGCCTCGGAGGGGACGTGCTGA

Protein sequence :
MDLDPETTLSLAGQDLDDTFNSVVPPLYQSAIFQFEDVGETKGYDYTRSGNPTRAALEDTLADLDGGAGAVACATGMAAV
STVTSLFDAGAHLICAHDCYGGTERLFSCLDDQDKLSVSYEDLSDRDALADAVRPETTALWVETPSNPLLRIVDLEALSE
FADAHDLLLVVDNTFLSPLLQRPIDYGADLVVYSTTKYLNGHSDVVGGAIIARTEALADRVDFAANAHGTVAAPFDSWLV
LRGAKTLPVRLRQHETNARALARSLDEHPAVQRVCYPGLYDHPGHEIARAQQNGYGGMVSFFVDDEQVDVEALLRSTEVF
ALAESLGGVESLIEHPATMSHASMAPEQREAAGITNGLIRLSVGIESTDDLRADLSQALTAAGAEAAASGHDTPVSAEAQ
APASEGTC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-64 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-65 42