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Name : SRU_0111 (SRU_0111) Accession : YP_444264.1 Strain : Salinibacter ruber DSM 13855 Genome accession: NC_007677 Putative virulence/resistance : Resistance Product : cadmium efflux ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 141539 - 144013 bp Length : 2475 bp Strand : + Note : identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525 DNA sequence : GTGCACAGTCCGTCCTCATCCGCCGTGGCCGAACAGGTTCAACTCGATCTCCCCGTCGTACTCCCACGCGTCCCCGACGC GACGGACGCGTGCGTCGGTCGCCTCACGGACCGCCTCCGTGGGCAGCCGGGCGTAAGCAGGGCCCACGTGGTCCCCGCCA CGAACGGCGCCCCGGACCGCCTCTGCGTGCACTACGACCCCGATACGATTGCGCGCTCTCGCATCCGGCGGCGCGTGCGG AGTGTCGGCGCGGACCTGACCGACCGGTACGGGCACCTCTCCTGGGCCGTTGAGGGAATCTCACGTCCCCGGCGCGCCCG GACCATCGCCAAGCGGCTGCGCCAAATCAATGGCGTGGTGGAGGCGGAGGCGCGTGCCGCCGAGCAGGTCCGCGTAGAGT ACGACCGGTCGTCGACGAGTGCGGAGGAGATCCGCGACGTGCTCCGGTCGATGAACGTGCGGCCGCAGGGCGATCGGCTG GCGGCGCAGGGGCTGGCGGCAGAGGCCGGCCGTGGAGACCGCGAGGAAGAACACGACCACGACCATGGTGGGATCTTCGG CGAGAAGACGGAACTGATCGTTGCCGTCGCGGCCGGCGTGTGCGTGGCCCTGGGCGTTGGGCTCTCCGTCGTGGGCGGCA CGCCCGGATGGGTCCCCTGGGGACTGTATGTCGGAGCCTACGCCCTTGGCGGGTACCACACCGTGCGGGAGGCGGTCGAG ACGCTCCGGGCCGGCGAGTTTGAAGTAGATTTCCTCATGCTGGTGGCCGCGGGGGGAGCGGCGGTGCTCGGGAAATGGCT GGAGGGGGCGTTTCTGCTGTTTCTCTTCTCCCTCGGCCACGCGCTGGAGCACTACGCGATGCGCCGCGCCCGCCGGGCCA TCGAGTCGCTCGCCGACCTGGCCCCAGACACCGCGCTCGTCCGCCGCGACGGAGAAGAACGAGAGGTTTCCGTCGATCAG CTGCGGGTGGGAGACACAGTCATCGTGAAGCCGAACGAGCGCATTCCGGCGGACGGATTCGTTACCCAGGGCGAGAGCGC CGTCAACCAGGCCCCGGTGACTGGCGAGAGCGTGCCGGTGGACAAGACACCCGTTGAAACCCCGGCGGCCGTGCGGGACC CGACGACCCTAGACGCGGCCCACCGCGTTTACGCCGGCACGATCAACGGGAGCGGCGTGCTGGAGGTACGCGTCACGAAG CGGGCGGGCGAGTCGACCCTTTCACGAGTCGTACAGATGGTCACGGAGGCGGAAGCCGAGAAGTCCCCGACCGAACGCTT CACCGACCGGTTTGAGCGGGTCTTCGTGCCGGCCGTCCTCGGGCTGGTGGGGCTTCTTCTCTTTGCCTGGGTGCCCCTCG GCGAGCCCGTTGCCGACAGCTTCTACCGCGCCATGGCTGTGCTCGTGGCCGCCAGTCCGTGCGCCCTCGCCATCGCCACG CCGAGTGCCGTGCTGAGTGCCCTGGCCCGGGCCGGGCAGGGGGGCGTGCTCGTGAAGGGGGGCGGCCCGCTCGAACACCT CGGCCGACTCGGCGCCGTCGCGTTCGACAAGACGGGCACCCTCACGGAGGGGGCGCCCCGCGTCACGGACGTGCGTCCCC ACAACGGAACGTCCGAAGAAGACCTTCTCCGGGCCGCCGTCGCCGCCGAACGGCTCAGCGACCACCCGCTGGCGGAGGCG GTGGTCCAGTACGGGGACGAACACCTCGAGGGCCGCCCGCCCGAAGACGCGGCGGAAATGAAGGGCATCACGGGCCGGGG CATTCGGGCCTCTGTGGGAGGGCGTCCCGTGCACGTCGGGAACGCGGCCCTTTTCGACGAGGTCGGCGGCCCACCGCCCC CGGACCCGCTCCGCGACGAGGTGGAGGCGCTGGAGGCCGATGGGCGAACGACGATGATTGTCCGTCGCGGGGACACCTAC CTCGGCGTGGTGGGCCTCGCCGATGCGCCCCGTCCAGAGGCCGCGGGCGTGGTGGAGCAGCTGCGCCGCGCGGGCATCCG GCGGATGGTCATGCTTTCGGGCGACAACCAGCGCGTCGTGGACGCGGCGGCCGAACGGCTGGGGCTCGACGAGGCCCGGG GCGACCTGCTGCCCAGCGACAAGGTGGACACCGTGCGGGCGCTCCGTCAGGACGAAGACGTGGCCATGGTGGGCGATGGG GTGAACGACGCGCCCGCCATGGCGAACGCCACCGTGGGCGTTGCGATGGGGGCGGCGGGATCGGACGCGGCCCTGGAGAC CGCCGACGTGGCCCTGATGGCCGACGACCTGTCCCAGCTGCCGTTCGCGGTGGGGCTCAGCCGACAGACCCGCCGCGTCA TCACGCAGAACCTGTGGATTGCGCTCGGCATGGTGGCGGTGCTGGTGCCCGCTACGATTGCGGGGCTCTCCATCGGCCCG GCCGTGGTGCTGCACGAAGGGTCGACGCTGCTCGTCGTGGGCAATGCGCTGCGGCTGCTCCGGTACGACACGTAG Protein sequence : MHSPSSSAVAEQVQLDLPVVLPRVPDATDACVGRLTDRLRGQPGVSRAHVVPATNGAPDRLCVHYDPDTIARSRIRRRVR SVGADLTDRYGHLSWAVEGISRPRRARTIAKRLRQINGVVEAEARAAEQVRVEYDRSSTSAEEIRDVLRSMNVRPQGDRL AAQGLAAEAGRGDREEEHDHDHGGIFGEKTELIVAVAAGVCVALGVGLSVVGGTPGWVPWGLYVGAYALGGYHTVREAVE TLRAGEFEVDFLMLVAAGGAAVLGKWLEGAFLLFLFSLGHALEHYAMRRARRAIESLADLAPDTALVRRDGEEREVSVDQ LRVGDTVIVKPNERIPADGFVTQGESAVNQAPVTGESVPVDKTPVETPAAVRDPTTLDAAHRVYAGTINGSGVLEVRVTK RAGESTLSRVVQMVTEAEAEKSPTERFTDRFERVFVPAVLGLVGLLLFAWVPLGEPVADSFYRAMAVLVAASPCALAIAT PSAVLSALARAGQGGVLVKGGGPLEHLGRLGAVAFDKTGTLTEGAPRVTDVRPHNGTSEEDLLRAAVAAERLSDHPLAEA VVQYGDEHLEGRPPEDAAEMKGITGRGIRASVGGRPVHVGNAALFDEVGGPPPPDPLRDEVEALEADGRTTMIVRRGDTY LGVVGLADAPRPEAAGVVEQLRRAGIRRMVMLSGDNQRVVDAAAERLGLDEARGDLLPSDKVDTVRALRQDEDVAMVGDG VNDAPAMANATVGVAMGAAGSDAALETADVALMADDLSQLPFAVGLSRQTRRVITQNLWIALGMVAVLVPATIAGLSIGP AVVLHEGSTLLVVGNALRLLRYDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 1e-95 | 42 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 1e-95 | 42 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 3e-94 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SRU_0111 | YP_444264.1 | cadmium efflux ATPase | BAC0124 | Protein | 2e-151 | 64 |
| SRU_0111 | YP_444264.1 | cadmium efflux ATPase | BAC0298 | Protein | 1e-78 | 42 |
| SRU_0111 | YP_444264.1 | cadmium efflux ATPase | BAC0092 | Protein | 9e-91 | 41 |
